|
Name : nanH (VCM66_1722) Accession : YP_002810480.1 Strain : Genome accession: NC_012578 Putative virulence/resistance : Virulence Product : neuraminidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG4409 EC number : 3.2.1.18 Position : 1880364 - 1882787 bp Length : 2424 bp Strand : + Note : - DNA sequence : TTGTCAATCAAGATGACTTCACAACGAAGAAGAGCATCGATTCACAAGGAAACAGATTCTAATATAAAGGGAGTAGATAT GCGTTTCAAAAACGTAAAGAAAACCGCTTTAATGCTTGCAATGTTCGGTATGGCGACAAGCTCAAACGCCGCACTTTTTG ACTATAACGCAACGGGTGACACTGAGTTTGACAGTCCAGCCAAACAGGGATGGATGCAAGACAACACGAATAATGGCAGC GGCGTTTTAACCAATGCAGATGGAATGCCCGCTTGGTTGGTGCAAGGTATTGGAGGGAGAGCTCAATGGACATATTCTCT CTCTACTAATCAACATGCCCAAGCATCAAGTTTCGGTTGGCGAATGACGACAGAAATGAAAGTGCTCAGTGGTGGAATGA TCACAAACTACTACGCCAACGGCACTCAGCGTGTCTTACCCATCATTTCATTAGATAGCAGTGGTAACTTAGTTGTTGAG TTTGAAGGGCAAACTGGACGCACCGTTTTGGCAACCGGCACAGCAGCAACGGAATATCATAAATTTGAATTGGTATTCCT TCCTGGAAGTAACCCATCCGCTAGCTTTTACTTCGATGGCAAACTCATTCGTGACAACATCCAGCCGACTGCATCAAAAC AAAATATGATCGTATGGGGGAATGGCTCATCAAATACGGATGGTGTCGCCGCTTATCGTGATATTAAGTTTGAAATTCAA GGCGACGTCATCTTCAGAGGCCCAGACCGTATACCGTCCATTGTAGCAAGTAGCGTAACACCAGGGGTGGTAACCGCATT TGCAGAGAAACGTGTGGGGGGAGGAGATCCCGGTGCTCTGAGTAATACCAATGACATAATCACTCGTACCTCACGAGATG GCGGTATAACTTGGGATACCGAGCTCAACCTCACTGAGCAAATCAATGTCAGTGATGAGTTTGATTTCTCCGATCCTCGG CCTATCTATGATCCTTCCTCCAATACGGTTCTTGTCTCTTATGCTCGATGGCCGACCGATGCCGCTCAAAACGGAGATCG AATAAAACCATGGATGCCAAACGGTATTTTTTACAGCGTCTATGATGTTGCATCAGGGAACTGGCAAGCGCCTATCGATG TTACCGATCAGGTGAAAGAACGCAGTTTCCAAATCGCTGGTTGGGGTGGTTCAGAGCTGTATCGCCGAAATACCAGCCTA AATAGCCAGCAAGACTGGCAATCAAACGCTAAGATCCGAATTGTTGATGGTGCAGCGAACCAGATACAAGTTGCCGATGG TAGCCGAAAATATGTTGTCACACTGAGTATTGATGAATCAGGTGGTCTAGTCGCTAATCTAAACGGTGTTAGTGCTCCGA TTATCCTGCAATCTGAACACGCAAAGGTACACTCTTTCCATGACTACGAACTTCAATATTCGGCGTTAAACCACACCACA ACGTTATTCGTGGATGGTCAGCAAATCACAACTTGGGCTGGCGAAGTATCGCAGGAGAACAACATTCAGTTTGGTAATGC GGATGCCCAAATTGACGGCAGACTGCATGTGCAAAAAATTGTTCTCACACAGCAAGGCCATAACCTCGTGGAGTTTGATG CTTTCTATTTAGCACAGCAAACCCCTGAAGTAGAGAAAGACCTTGAAAAGCTTGGTTGGACAAAAATTAAAACGGGCAAC ACCATGAGTTTGTATGGAAATGCCAGTGTCAACCCAGGACCGGGTCATGGCATCACCCTTACTCGACAACAAAATATCAG TGGCAGCCAAAACGGCCGCTTGATCTACCCAGCGATTGTGCTTGATCGTTTCTTCTTGAACGTCATGTCTATTTACAGTG ATGATGGCGGTTCAAACTGGCAAACCGGTTCAACACTCCCTATCCCCTTTCGCTGGAAGAGTTCGAGTATCCTAGAAACT CTCGAACCTAGTGAAGCTGATATGGTTGAACTCCAAAACGGTGATCTACTCCTTACTGCACGCCTTGATTTTAACCAAAT CGTTAATGGTGTGAACTATAGCCCACGCCAGCAATTTTTGAGTAAAGATGGTGGAATCACGTGGAGCCTACTTGAGGCTA ACAACGCTAACGTCTTTAGCAATATCAGTACTGGTACCGTTGATGCTTCTATTACTCGGTTCGAGCAAAGTGACGGTAGC CATTTCTTACTCTTTACTAACCCACAAGGAAACCCTGCGGGGACAAATGGCAGGCAAAATCTAGGCTTATGGTTTAGCTT CGATGAAGGGGTGACATGGAAAGGACCAATTCAACTTGTTAATGGTGCATCGGCATATTCTGATATTTATCAATTGGATT CGGAAAATGCGATTGTCATTGTTGAAACGGATAATTCAAATATGCGAATTCTTCGTATGCCTATCACATTGCTAAAACAG AAGCTGACCTTATCGCAAAACTAA Protein sequence : MSIKMTSQRRRASIHKETDSNIKGVDMRFKNVKKTALMLAMFGMATSSNAALFDYNATGDTEFDSPAKQGWMQDNTNNGS GVLTNADGMPAWLVQGIGGRAQWTYSLSTNQHAQASSFGWRMTTEMKVLSGGMITNYYANGTQRVLPIISLDSSGNLVVE FEGQTGRTVLATGTAATEYHKFELVFLPGSNPSASFYFDGKLIRDNIQPTASKQNMIVWGNGSSNTDGVAAYRDIKFEIQ GDVIFRGPDRIPSIVASSVTPGVVTAFAEKRVGGGDPGALSNTNDIITRTSRDGGITWDTELNLTEQINVSDEFDFSDPR PIYDPSSNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVASGNWQAPIDVTDQVKERSFQIAGWGGSELYRRNTSL NSQQDWQSNAKIRIVDGAANQIQVADGSRKYVVTLSIDESGGLVANLNGVSAPIILQSEHAKVHSFHDYELQYSALNHTT TLFVDGQQITTWAGEVSQENNIQFGNADAQIDGRLHVQKIVLTQQGHNLVEFDAFYLAQQTPEVEKDLEKLGWTKIKTGN TMSLYGNASVNPGPGHGITLTRQQNISGSQNGRLIYPAIVLDRFFLNVMSIYSDDGGSNWQTGSTLPIPFRWKSSSILET LEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQFLSKDGGITWSLLEANNANVFSNISTGTVDASITRFEQSDGS HFLLFTNPQGNPAGTNGRQNLGLWFSFDEGVTWKGPIQLVNGASAYSDIYQLDSENAIVIVETDNSNMRILRMPITLLKQ KLTLSQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1784 | NP_231419.1 | neuraminidase | Not tested | VPI-2 | Protein | 0.0 | 100 |
| nanH | YP_001217324.1 | neuraminidase | Not tested | VPI-2 | Protein | 0.0 | 100 |
| nanH | AAW31751.2 | neuraminidase | Not tested | VPI-2 | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| nanH | YP_002810480.1 | neuraminidase | VFG1117 | Protein | 0.0 | 100 |
