Gene Information

Name : CLM_1026 (CLM_1026)
Accession : YP_002803247.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : 2.3.1.28
Position : 1081823 - 1082473 bp
Length : 651 bp
Strand : +
Note : identified by match to protein family HMM PF00132

DNA sequence : 
ATGAATAATACATTTAATCATTGGACAGAAATAAAATATTTAAAGGACTCAATAAAAAATCCTTTAATTGAAGTAGGAGA
ATACACATATTATTCAGGATATTATGCAGGTGGAGATTTTGAAGATGTTTGTGTGCGATATATATGGGGAGACGAAAAAT
CAAAAGAAATGTACAATCCTATAGAAGACTATGGATGGACTTTAGATAAAATAAAAATAGGTAAATATTGTTGTTTTGCT
AGCGGAGTAGCATTTATGATGGGAGGAAATCACAATCATAATCCTAATTGGATAACTGTATATCCATTTAAAAATAAGTT
GCTAGATTCATATAAGCCTAAAGGAGATACAATTGTAGGTAATGACGTATGGATTGGTACAGAAGCAATGATTATGCCAG
GAATTACAATTGGGGATGGGGCAATAATCGGAGTTAGGTCAATAGTTACAAAAAATGTAGAACCTTATACTGTTGTAGCA
GGAAATCCAGCAAAACATATAAAAGAAAGATTTGATAAAGAAAAGATAGATATGTTACTTAAAATAAAATGGTGGGATTG
GGAAGAAGATCATATTAAAAAATGTATAGATATATTGTCTAGTTCAGATATAGATGAATTATATAAATATTATGAAATGA
ATATAAAATAA

Protein sequence : 
MNNTFNHWTEIKYLKDSIKNPLIEVGEYTYYSGYYAGGDFEDVCVRYIWGDEKSKEMYNPIEDYGWTLDKIKIGKYCCFA
SGVAFMMGGNHNHNPNWITVYPFKNKLLDSYKPKGDTIVGNDVWIGTEAMIMPGITIGDGAIIGVRSIVTKNVEPYTVVA
GNPAKHIKERFDKEKIDMLLKIKWWDWEEDHIKKCIDILSSSDIDELYKYYEMNIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-36 47
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-36 47
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-37 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLM_1026 YP_002803247.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 3e-97 100
CLM_1026 YP_002803247.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 8e-37 47
CLM_1026 YP_002803247.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 8e-37 47
CLM_1026 YP_002803247.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 7e-38 47
CLM_1026 YP_002803247.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 1e-36 47
CLM_1026 YP_002803247.1 chloramphenicol acetyltransferase CP000675.2.gene50.p0 Protein 2e-38 46
CLM_1026 YP_002803247.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 5e-36 43
CLM_1026 YP_002803247.1 chloramphenicol acetyltransferase AM180355.1.gene2499. Protein 7e-31 42