Gene Information

Name : CLM_0933 (CLM_0933)
Accession : YP_002803163.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 992583 - 993275 bp
Length : 693 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGGAATTATTAAAAGTTAAAGATCTTTGTAAAAGTTATGGAAAAGGTGAAATAAAAGTAGATGCTTTAAAAAGCATTAA
TTTAACTATAAATCAAGGAGAATTTGTGGCTATAGTTGGTCCTTCAGGTTCTGGTAAAAGTACATTACTTCATCTTTTAG
GGGGAGTAGATAGACCAAGTTCAGGTAAAATTATTTTAGAAGGTACAGATATATATTCTTTAAAGGAAAATGAATTAGCT
ATATTAAGAAGAAGAAAAATAGGATTTATATTTCAATTTTATAATCTAATACCAGTACTTACTGCAGAAGAAAATATAGA
AATGCCAGTGCTTTTAGATAATAAAAAACCAGACAAAAAATACATGAAGGAACTTTTAGATATATTAGGATTAAGAGAAA
GAAAAAATCATTTACCTGCACAGTTATCTGGTGGGCAACAACAAAGGGTTTCTATAGGTAGAGCTTTAGCTAATAAGCCA
TCTATAATATTTGCAGATGAGCCTACAGGTAACCTAGACTCTAAAAATTCCAAGGAAATAATGGAGCTTTTAAGATATTC
AGTTAAAAAATATAATCAAACACTAGTGCTTATAACCCATGACTTAAATATAGCAAAAATGGCAGATAGAGTTATAACCA
TAGCAGATGGAGAAGTTAAAGGGGACGAGGTGACTAAAGTTGAAAAGCTATAG

Protein sequence : 
MELLKVKDLCKSYGKGEIKVDALKSINLTINQGEFVAIVGPSGSGKSTLLHLLGGVDRPSSGKIILEGTDIYSLKENELA
ILRRRKIGFIFQFYNLIPVLTAEENIEMPVLLDNKKPDKKYMKELLDILGLRERKNHLPAQLSGGQQQRVSIGRALANKP
SIIFADEPTGNLDSKNSKEIMELLRYSVKKYNQTLVLITHDLNIAKMADRVITIADGEVKGDEVTKVEKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-43 50
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-43 50
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-43 50
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-42 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLM_0933 YP_002803163.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-66 60
CLM_0933 YP_002803163.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-55 52
CLM_0933 YP_002803163.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-44 48
CLM_0933 YP_002803163.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-37 43
CLM_0933 YP_002803163.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 9e-38 42