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Name : dnaB (CLM_4125) Accession : YP_002806163.1 Strain : Clostridium botulinum Kyoto Genome accession: NC_012563 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : 3.6.1.- Position : 4131157 - 4132494 bp Length : 1338 bp Strand : - Note : unwinds double stranded DNA DNA sequence : ATGGATGCACCCATAAAAAGTATGCCGCAGAGTATAGATGCAGAGCAAAATGTATTAGGGGCAATGATTATAGATAAAAC TTCCATAGCAGAGGCTGTGGAAGTTTTAAAAAGTGAAGATTTTTATAAAGATTCTCATAAAATTATATTTAGTGGAATTA TAGAGCTTTATCAAAAGGATATAGCAGTAGATATGCTAACTCTTACGGAAAATCTTAAGTCACGAGATAAACTAGATGCA GTAGGTGGGGTTACTTATATAACGGAGCTTTGTAACTCTATAGTTTCTACAGCTAATATTCAGTCTTATATAGATATAAT AAAGGATAAATCTACATTAAGAAGGCTTATAAAGTCATCTACTGAAATAATAGAGAACTGTTATAACAGACAGGATAATG TAGAAGAAATAATAGATTCTGCAGAGAAAAAAATATTTCACATATCCAACCAAAATACTACAACTGATTTTGAACCATTA AGTAATGTTTTGGAAAGAGGATTTATTCAAATTGAAAACTTATTTAAAAATAAAGGTGAAACTACAGGGGTTGCATCTGG TTTTAGAGAACTAGACGCTAAAACCTCAGGTTTTCAAAAGTCTGATATGATATTAATAGCAGCAAGACCATCAATGGGTA AAACTACATTTGCTCTAAACATAGCAGAATATGCAGCTCTTAGAGAGGGAAAAAGTGTAGCAATCTTTTCCCTGGAAATG TCAAAAGAGCAACTTTCTTATAAATTGCTTTGTTCCCAAGCTAATATTGATATGTTGAGGCTTAGAACTGGTAACTTAGA GGATAAAGACTGGGAGAATATAGCTAGGGTTTCAGGGCCTTTAGCAGCAGCAAAGATATTTATAGATGATACTGCAGGTA TGTCTGTAATGGAAATGCGTTCTAAATGTAGGAGATTAAAAATAGAACATGGAATAGATATGGTTTTAATAGATTATCTT CAGCTTATGAGTGGAGGTAAAGGGTCTACTGAAAGTAGACAACAAGAAGTCTCAGAAATATCTAGATCTATAAAAGCCTT AGCTAAAGAAATGGATTGTCCAGTTATAGCCTTATCTCAATTATCTCGTGCTCCGGAGGCTAGATCGGATCATAGACCAA TGCTTTCAGATCTTAGAGAATCTGGATCTATAGAACAGGATGCTGACGTAGTTATGTTTTTATATAGAGATGAATACTAT GACAAAGAAACAGAAGATAAAAACATGGCAGAATGCATTATAGCCAAGCAAAGAAATGGTCCTACGGGTACAGTTAAAAT GGCATGGCTTGGACAATACAGTAAATTTGGTAATTTAGATGTGATACATCAAGAATAA Protein sequence : MDAPIKSMPQSIDAEQNVLGAMIIDKTSIAEAVEVLKSEDFYKDSHKIIFSGIIELYQKDIAVDMLTLTENLKSRDKLDA VGGVTYITELCNSIVSTANIQSYIDIIKDKSTLRRLIKSSTEIIENCYNRQDNVEEIIDSAEKKIFHISNQNTTTDFEPL SNVLERGFIQIENLFKNKGETTGVASGFRELDAKTSGFQKSDMILIAARPSMGKTTFALNIAEYAALREGKSVAIFSLEM SKEQLSYKLLCSQANIDMLRLRTGNLEDKDWENIARVSGPLAAAKIFIDDTAGMSVMEMRSKCRRLKIEHGIDMVLIDYL QLMSGGKGSTESRQQEVSEISRSIKALAKEMDCPVIALSQLSRAPEARSDHRPMLSDLRESGSIEQDADVVMFLYRDEYY DKETEDKNMAECIIAKQRNGPTGTVKMAWLGQYSKFGNLDVIHQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-72 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 2e-72 | 42 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 7e-75 | 41 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 9e-84 | 41 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 5e-79 | 41 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-80 | 41 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 8e-81 | 41 |
