Gene Information

Name : CLM_3822 (CLM_3822)
Accession : YP_002805902.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG4977
EC number : -
Position : 3864479 - 3864886 bp
Length : 408 bp
Strand : -
Note : identified by match to protein family HMM PF00165

DNA sequence : 
ATGGATATGAAAGACCTCATATTAGAAATAATTGAACATATAGAATCTAATTTAGGTCAAGAAATGAATTTGGATACCAT
AGCAGATAAGTTTGGTTATTCAAAATTTCATTTGAATCGGATATTTTTTGAAAACGTGGGAGCTACGATTTACAAGTATA
TTCAATTTCGCAGACTATCTGTTGCAGCAGAAAAACTTGTAACGACTGGCAAACCCATCGTTGAGATTGCATATGACACA
GGTTATCAATCACAACAGGCCTTTTCAATTGCATTTCGGCAATTTTATGGTTATACCCCGCTGCAATATAGGCGTATAGG
AGTTTTCATACCCCTTTTAAAACGTTTTACAGCACAAAATATTATAATATCCCTATATGAAAATATCAACATGCCGTTTG
CTGCGTAA

Protein sequence : 
MDMKDLILEIIEHIESNLGQEMNLDTIADKFGYSKFHLNRIFFENVGATIYKYIQFRRLSVAAEKLVTTGKPIVEIAYDT
GYQSQQAFSIAFRQFYGYTPLQYRRIGVFIPLLKRFTAQNIIISLYENINMPFAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 7e-14 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLM_3822 YP_002805902.1 AraC family transcriptional regulator CP000647.1.gene4499. Protein 5e-15 46
CLM_3822 YP_002805902.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 2e-14 44
CLM_3822 YP_002805902.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 5e-14 43
CLM_3822 YP_002805902.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 2e-14 43
CLM_3822 YP_002805902.1 AraC family transcriptional regulator BAC0371 Protein 2e-14 43
CLM_3822 YP_002805902.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 1e-14 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLM_3822 YP_002805902.1 AraC family transcriptional regulator VFG0585 Protein 2e-14 44