Gene Information

Name : CLM_0381 (CLM_0381)
Accession : YP_002802636.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Virulence
Product : ferrichrome transport ATP-binding protein FhuC
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 401861 - 402685 bp
Length : 825 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGAATAGCATAAAAGTGGAAAATCTATCTATTGCTTATGATGAAAGCATAATAGTAGAAAACTTAAATGTAAGCATTCC
TAAAGGGAAAATAACAACTATTATAGGACCTAATGGATGTGGTAAATCAACTATATTAAAAACTATAGGACGTATTATGA
AACCTAAAAATGGCATGATTTATATAAATGGAGAAGATATAAAAAAGTTGTCCACAAAAGAAATTGCAAAAAAAATGGCA
ATTTTGCCTCAGGGCCCTCAATCACCTAGTGGCCTTACAGTAGGTGAACTTGTAGCTTATGGACGCTATCCTCATCAAAG
GGGATTGGGTAGCCTTACATCTGAGGATAAAAAAATTATAGAGTGGGCATTGGAGGCTACAAAAATTTCAGAATTTGAAC
ATAGATCTGTAGATGCTCTTTCTGGTGGACAAAGACAGAGAGTTTGGATAGCTATGGCATTAGCACAACAGACAGATTTA
ATTCTTTTAGACGAGCCAACAACTTATTTAGATTTATCTCATCAATTAGAGGTGTTAGAACTTCTATATGATTTAAATAA
AAAACAAAAGTGCTCTATAGTTATGGTAATACACGATTTAAATCTTGCAGCACGATTTGCAGATTATATGATTGCAATCC
GTAGTGGAAAAGTTATTTCCAAAGGTGCACCAGAAATTGTTATGACGTCATCTGTTTTAAGAGAAACCTTCAATATAGAT
GTGGAGATTGTAAAGGATCCCCGTACACATAGGCCAGTTTGTATTACTTATGATTTAATTAAAGCAGACAATATACAGGA
AGTAAGGAGAGTGAGATACAGTTGA

Protein sequence :
MNSIKVENLSIAYDESIIVENLNVSIPKGKITTIIGPNGCGKSTILKTIGRIMKPKNGMIYINGEDIKKLSTKEIAKKMA
ILPQGPQSPSGLTVGELVAYGRYPHQRGLGSLTSEDKKIIEWALEATKISEFEHRSVDALSGGQRQRVWIAMALAQQTDL
ILLDEPTTYLDLSHQLEVLELLYDLNKKQKCSIVMVIHDLNLAARFADYMIAIRSGKVISKGAPEIVMTSSVLRETFNID
VEIVKDPRTHRPVCITYDLIKADNIQEVRRVRYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-60 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-60 47
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-57 47
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-57 47
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-57 47
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-57 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-54 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-55 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-55 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-55 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-55 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 7e-55 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-55 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLM_0381 YP_002802636.1 ferrichrome transport ATP-binding protein FhuC BAC0164 Protein 1e-55 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLM_0381 YP_002802636.1 ferrichrome transport ATP-binding protein FhuC VFG0925 Protein 8e-56 45
CLM_0381 YP_002802636.1 ferrichrome transport ATP-binding protein FhuC VFG1042 Protein 1e-55 42