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Name : CLM_3515 (CLM_3515) Accession : YP_002805630.1 Strain : Clostridium botulinum Kyoto Genome accession: NC_012563 Putative virulence/resistance : Virulence Product : exopolysaccharide biosynthesis protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3538373 - 3540238 bp Length : 1866 bp Strand : - Note : identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321 DNA sequence : ATGAGAAAAGATAGGGAATTGATTCTTTATGATATATTATTAATAATTTTATCATTATATTTAGCAATTTTATTAAGATT CGATTTTGGTATGGCTTCTATGGCTTCGGAATTTAAAAAATATATGATATTTTTTAAGTTATCAGTAATTCCAGTTATAA TAATAACCTTATTTTTTAATAAAATATTTAATCTCTATAGTAGTATATGGAAATATGCTTCAGTAGAAGAACTTATGTCT ATAATTTATTCAGTTTCTATATCTAATATTATATTCATAATTTATAGTTATTTTATTAATTATAAAATTCTAGAAAGTAA TTATTATAGATTCCCATTTACTGTACATATAATATTTTGGATTCTATCTATAGTATCCCTAGGAGGTACAAGGTTTATAT ATAGAGTTATAGAAGATAAAGAATCTAATAAGAACAAATGTAACTGTGATTCTAAAGAAAAGAAATTACTCATAATAGGG GCGGGGGATGCAGCAGCTCTTATTATAAAAGAGATAAAAAGAAATAAGGAACTAAATTATAATATAATAGGTCTTATAGA TGATGATATAGAAAAGCTAGGCAAGAGAATAAATGGTATACCTGTTTTAGGTGGAAGAGAAAGTATTATACGTATGTCTA AAAATAAAAAAATAGATGAAATAATATTGGCTATACCTTCGGCATCATCTGCAACAAAAAGCGAAATAGTGTCTATATGT AAAGAAACTAGTTGTAAATTAAAAACATTACCAAGCATGGATAAGGTAATACAGGGCAAGTTTAATATGAGTAAGTTAAG AGATGTAAGTATTGAGGATTTGCTTGGAAGAGAAGAAGTTAAATTAGATGATAGTTGTATAAACAAATATATAAAGGATA AAGTGGTTTTAGTTACTGGTGGAGGGGGATCTATTGGGTCAGAACTTTGTAGACAAATAGTTAAATTTTCACCTAAAAAG CTTTTAATATTAGATATATATGAAAACAATGTCTATGATGTTCAAATGGAACTAAATTATAAATATCCAGAACTGGACAA AGCTGTTATAATAGCTTCTATAAGGGATGAAAAGAGACTAAAAGATATATTTTCATTATATAAACCAGATGTAGTTTTTC ATGCAGCAGCTCATAAGCATGTTCCACTAATGGAAGAGAATCCAGCAGAATCTATTAAAAATAATGTAATAGGTACCTAT AATTTAATAAAATGTGCCCATGAATTTGGGATTGAGCGTTTCGTACAAATAAGTACAGACAAAGCTGTTAATCCAACTAA TATAATGGGAGCTACAAAAAGATTTTGTGAAATAATGATTCAGGCATTTGATAAAATAAGTAAAACTGAGTTTGTAGCAG TTAGATTTGGGAATGTTTTAGGAAGTAATGGATCTGTTATTCCATTATTTAAAAAACAAATAACTCATGGAGGTCCTGTT ACTGTAACTCATCCAGAAATAAATAGATATTTTATGACTATACCAGAAGCAGCTCAATTAGTTATACAAGCAGGAGCTAT GGCAAAAGGTGGAGAAATATTTGTTTTGGATATGGGAAAGCCAGTTAAAATTGTAGATTTAGCTAAAGATTTAATAACCT TATCTGGGTATAAGCCAGGGGAGGATATTAAAATTGAGTATACAGGATTAAGACCTGGGGAAAAATTATATGAAGAATTA TTAATGGATGAAATAGCTTTAACATCAACAGGACATAATAAAATATTTGTAGAAAAGCCTATGGAAAATAATACAGACTT TGTAGAAAAATCCGTAGAAGAATTTAAAAAAGTTGTTTATAATGATAAAGAAGAAATATTTGCATTGATAGAAAAGAAGG TTCCAACATATATAAGAAAAAAATAA Protein sequence : MRKDRELILYDILLIILSLYLAILLRFDFGMASMASEFKKYMIFFKLSVIPVIIITLFFNKIFNLYSSIWKYASVEELMS IIYSVSISNIIFIIYSYFINYKILESNYYRFPFTVHIIFWILSIVSLGGTRFIYRVIEDKESNKNKCNCDSKEKKLLIIG AGDAAALIIKEIKRNKELNYNIIGLIDDDIEKLGKRINGIPVLGGRESIIRMSKNKKIDEIILAIPSASSATKSEIVSIC KETSCKLKTLPSMDKVIQGKFNMSKLRDVSIEDLLGREEVKLDDSCINKYIKDKVVLVTGGGGSIGSELCRQIVKFSPKK LLILDIYENNVYDVQMELNYKYPELDKAVIIASIRDEKRLKDIFSLYKPDVVFHAAAHKHVPLMEENPAESIKNNVIGTY NLIKCAHEFGIERFVQISTDKAVNPTNIMGATKRFCEIMIQAFDKISKTEFVAVRFGNVLGSNGSVIPLFKKQITHGGPV TVTHPEINRYFMTIPEAAQLVIQAGAMAKGGEIFVLDMGKPVKIVDLAKDLITLSGYKPGEDIKIEYTGLRPGEKLYEEL LMDEIALTSTGHNKIFVEKPMENNTDFVEKSVEEFKKVVYNDKEEIFALIEKKVPTYIRKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 6e-94 | 48 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-92 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CLM_3515 | YP_002805630.1 | exopolysaccharide biosynthesis protein | VFG1300 | Protein | 5e-91 | 44 |
