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Name : polA (CLM_3411) Accession : YP_002805528.1 Strain : Clostridium botulinum Kyoto Genome accession: NC_012563 Putative virulence/resistance : Unknown Product : DNA polymerase I Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0749 EC number : 2.7.7.7 Position : 3440204 - 3442831 bp Length : 2628 bp Strand : - Note : has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair DNA sequence : ATGAATAAAGAAAGATTATTAATATTAGATAGTAATAGTTTATTAAATAGAGCTTTTTATGCATTACCTGATCTTATGAC TGGAGAGGGAATTCATACTAATGCTATATATGGTTTTGTTAATATGCTTTTAAAAATGAAAGAAGAGATAAACCCAGATT ATATAGTTGCAGCTTTTGATAGAAAGGCACCTACCTTTAGACATGAAGAATATAAGGACTACAAAGCAGGTAGAAAAAAG ATGCCAGAGGAACTTGCACAGCAGTTTCCTATAGTAAAAGAGCTTTTGTCCGCATTAGCCATAAATATATTCGAAATTGA TGGATTTGAAGCAGACGATCTAATAGGAACTTTATCTGTATTTGCAGAGGAAAAAGGAATAGAAGTTTACATAGTTACAG GAGATAAAGATGCCCTACAATTGGCTACAGATAATGTAAAAGTAGTTATAACTAAAAAGGGTATTACAGAAAAAGAAATT TATGATAAAAATAGAATGATAGAAGAGTTTGGAGTTACTCCTAAAGAATTTATAGATGTAAAAGGTCTTATGGGAGACAC ATCTGACAATATACCTGGAGTACCTGGAATAGGTGAAAAAACCGCCTTTAAGCTTATAAAAGAATATAAAAGTATAGAAA CAGTACTTGAAAACATAGAGAATATAAAAGGGAAAAAATTAAAGGAAAATTTACATGAATATAGAGAACAGGCTATATTT AGCAAAAAATTAGCTACTATTATATGTAATGTTCCTATAGATATGAGTTTAGAAGATATAAAATCAAAGGAAGAATATGA TATAAACAAAGTTAGAAAAATGTTTGAAAGGTTAGAATTTAAATCTTTAATGAATAAAGTAAGCAAAAGTGATGAGGAAG AAACTGTAGAAGAGGAAGTTTCTTATAAAAATATAGTTTCTCTAGAAGAATTTAAAGATCTAAAAAATAATATAATAAAA TATAAAGAAAATGATTTATATCTGTATTTTGAATTAGAAGATATAGTTTTATTTTCTAAATCTAGAGTAAAAACATTATA TGCTAATTTTAAAGATGAAGTTTATAGAATAGACTTTGAAATGTTGCTAAATAATACTAAAGAACAATTTATAGAAGTAT GCAGGGAAATGTTTGAGAGTAAAGAAATTAAAAAAATTACCTATAATGCAAAAAATCCAAGGACTATACTAAGAAAATTA GGAATAGATTTTAATGGTATAAAATTTGATATAAATTTAGCTGCATACCTAATAGATCCAGTGAGGAAAGAATATGAGAT ATCTAGTTTAGCTTCAGAATATTTGTTTAAAAATATAAATAGAGAAGATGAATTTTTAAAAATAAAAGAAGTTAATATAA TGCCTAATTTATATAAAGTGCTGGAAGAAAAAATAAAAGATCAAGATATGGAAGAATTGCTATATAAGGTAGAACAACCT CTTACAGAAACATTATCAGCTATGGAAACAGAAGGTTTTAAAGTTGATAAAGATATACTTTTACAGCTAGAGAAAAAATT TAAAGGGGAAATAGAAAGTACTCAGCTAGAAATATATTCAATGTCTGAAGAAAAATTTAATATAAATTCTCCTAAACAGT TAGGGAAAATACTCTTTGAAAAATTAGATTTACCTGTTATAAAGAAAACAAAGACAGGATATTCTACTAATGCAGAGGTA CTGGATAAATTAAGAGATAAACATCCAATAATAGATAAAATAACTTATTATAGACAATTAACAAAAATATACTCTACTTA TATAGAAGGGCTAAAAGCTGCTATAGATGAGGATGGAAAAATACATTCAAATTTTAATCAAACTGTTACAGCTACAGGGA GATTATCTAGTACAGAGCCTAATCTTCAAAATATACCTATAAAATATGAAATGGGAAGAGAAATAAGAAAGGTATTTATC CCTAATACAGGGGATTCTGTAATACTTTCAGCGGATTATTCACAAATAGAATTAAGAGTATTAGCACATATATCTGATGA TAAAAATATGATAAGTGCATTTAATGAACATGATGATATTCATACTAAAACTGCATCAGAAGTGTTTAAAGTTCCAATAG AAGAAGTAACACCTCTTATGAGAAGTAACGCTAAAGCAGTTAATTTTGGTATAGTTTATGGTATAGGAGACTTTAGCTTA TCTCAAGATTTAAATATAACTAGAAAAGAAGCAAAGCAGTATATAGATGCTTATTTGGAGAGATATCCTAATGTAAAACT TTATTTAGAAAATATAGTAGAAGAAGCCGTTGAAAAAGGGTATGTAAGTACTATATTAAATAGAAGAAGATATATAAAAG AGGTTAAGTCTTCAAATAAAATAGTTAAAGCTGCAGGGGAAAGGCTAGCTATGAATAGTCCAATCCAAGGAAGTGCAGCA GATATAATAAAATTAGCTATGGTAAATGTTCATAGAAAATTAAAAGAAGATAATTTTAAAAGTAGTATAATATTACAAGT ACATGATGAATTAATATTAAATGTTCATAAAGATGAACTAGAAAGAATCAAAGCTTTAGTAAAAAAAGAAATGGAACAGG TTTTAGAATTAAAAGTTGGGTTAGACGTGGATATAAACATAGGTAATAATTGGTATGAAGCAAAGTAG Protein sequence : MNKERLLILDSNSLLNRAFYALPDLMTGEGIHTNAIYGFVNMLLKMKEEINPDYIVAAFDRKAPTFRHEEYKDYKAGRKK MPEELAQQFPIVKELLSALAINIFEIDGFEADDLIGTLSVFAEEKGIEVYIVTGDKDALQLATDNVKVVITKKGITEKEI YDKNRMIEEFGVTPKEFIDVKGLMGDTSDNIPGVPGIGEKTAFKLIKEYKSIETVLENIENIKGKKLKENLHEYREQAIF SKKLATIICNVPIDMSLEDIKSKEEYDINKVRKMFERLEFKSLMNKVSKSDEEETVEEEVSYKNIVSLEEFKDLKNNIIK YKENDLYLYFELEDIVLFSKSRVKTLYANFKDEVYRIDFEMLLNNTKEQFIEVCREMFESKEIKKITYNAKNPRTILRKL GIDFNGIKFDINLAAYLIDPVRKEYEISSLASEYLFKNINREDEFLKIKEVNIMPNLYKVLEEKIKDQDMEELLYKVEQP LTETLSAMETEGFKVDKDILLQLEKKFKGEIESTQLEIYSMSEEKFNINSPKQLGKILFEKLDLPVIKKTKTGYSTNAEV LDKLRDKHPIIDKITYYRQLTKIYSTYIEGLKAAIDEDGKIHSNFNQTVTATGRLSSTEPNLQNIPIKYEMGREIRKVFI PNTGDSVILSADYSQIELRVLAHISDDKNMISAFNEHDDIHTKTASEVFKVPIEEVTPLMRSNAKAVNFGIVYGIGDFSL SQDLNITRKEAKQYIDAYLERYPNVKLYLENIVEEAVEKGYVSTILNRRRYIKEVKSSNKIVKAAGERLAMNSPIQGSAA DIIKLAMVNVHRKLKEDNFKSSIILQVHDELILNVHKDELERIKALVKKEMEQVLELKVGLDVDINIGNNWYEAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| polA | YP_281523.1 | DNA polymerase I | Not tested | Not named | Protein | 2e-165 | 45 |
