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Name : ribD (CLM_3262) Accession : YP_002805391.1 Strain : Clostridium botulinum Kyoto Genome accession: NC_012563 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 3283714 - 3284811 bp Length : 1098 bp Strand : - Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGGAAGATTATAATTTTTATATGGAAAAAGCCTTGAAACTAGCTGAAAGAGGTGAGGGTAAAGTTAATCCTAATCCTAA AGTAGGAGCTATAGTAGTTAAGAACAACAAAATAATTGGAGAAGGTTATCACAAATATTTTGGAGGATCTCATGCAGAAG TTTATGCTCTTAGAGAAGCAGGAGAAAAGGCTAAAGGGGCTACTATATATGTTACATTAGAGCCCTGCTCACATTATGGT AAAACTCCTCCCTGTGCAGAGTCTATAGTAAAGATGGGAATATCTAAGGCTATTATAGCTATGAAAGATCCCAATCCTTT AGTTGAGGGTAGAGGGATAGATATTTTAAAGCAAAATGGAATAGAAGTTGTAACAGGGATTATGGAAAAAGAAAGTAAAA AATTAAATGAAGTCTTTATAAAATACATAACTAAAAAGAAACCTTTTGTAGTTTTAAAAACTGCTTCTACCTTAGATGGT AAGATTGCTACAAGAACAGGAGAATCAAAATGGATAACAGGAGAAGATGCAAGATATAAAGTACAGCAAATAAGAAATGA TTTATCCGGAATAATGGTAGGAATAGGGACAATTATAAAAGATAATCCTCTTTTAACTACAAGAATAGAAGGGGGAAGAA GTCCAAGGGCAATAATAGTAGATTCCAATCTTAGAATTCCCTTAGAATCTAAAATATTAGAAACCCTTAATAAAAGAGCT ATTTATATAGCAACAACTAAAAAACATAACAATTTTTCAAAAAAGAATGCTTTAGAAAATTTAGGGGCTAAGGTTTTAGA GTTTGAGGAAAATGAAGAGGGAAAAGTTCCATTGAATGAATTAATGCAATATTTAGGATCAGAAGGAGTGGATAGTATTC TTTTAGAAGGAGGCAGCACATTAAATTTTTCTGCACTAAAAGAAGGGATAGTAGATAAAGTTATGTGTTTTATAGCACCC AAAATAATGGGAGGACAGGATTCAAAAAATATGATAGGTGGAAATGGGGTAGAAAGCTTAAAAGATATATTTAATCTACA AAACTTAAAATTTGAAAAAATAGGGCAGGATATACTTATTGAAGGCTATGTATATTAG Protein sequence : MEDYNFYMEKALKLAERGEGKVNPNPKVGAIVVKNNKIIGEGYHKYFGGSHAEVYALREAGEKAKGATIYVTLEPCSHYG KTPPCAESIVKMGISKAIIAMKDPNPLVEGRGIDILKQNGIEVVTGIMEKESKKLNEVFIKYITKKKPFVVLKTASTLDG KIATRTGESKWITGEDARYKVQQIRNDLSGIMVGIGTIIKDNPLLTTRIEGGRSPRAIIVDSNLRIPLESKILETLNKRA IYIATTKKHNNFSKKNALENLGAKVLEFEENEEGKVPLNELMQYLGSEGVDSILLEGGSTLNFSALKEGIVDKVMCFIAP KIMGGQDSKNMIGGNGVESLKDIFNLQNLKFEKIGQDILIEGYVY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-57 | 43 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-57 | 43 |
