Gene Information

Name : nagE (CLM_3202)
Accession : YP_002805338.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Unknown
Product : PTS system N-acetylglucosamine-specific transporter subunit IIBC
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1263
EC number : 2.7.1.69
Position : 3224832 - 3226274 bp
Length : 1443 bp
Strand : +
Note : identified by match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00826; match to protein family HMM TIGR01998

DNA sequence :
ATGGCGAAAAACAGTAAATTTTTATCAAAAATTCAAAGGCTAGGTAAATCTCTTATGACTCCTATAGCTGTATTGCCAGC
AGCTGCCCTACTTCTTAGATTAGGACAGCCTGATATTTGGAGTTGGGCTGGTTCTTTACCAAGTGGTATCCCTTGGATGT
CTACAGCTGGAGCTGCTATTTTTGATAACTTATCCCTTATTTTTGCTATAGGTATAGCTGTAGGATTAGCAGAGGAAAAT
AATGGCGTTGCTGCGATTTCTGCTACTGTTGGTTTCCTTGTTCTAACAAAGGTTTCTTTAAAATTTGATGATACCATTAA
TATGGGAGTCTTATCCGGTATAATTGTAGGTATATTATCTGCATCACTTTATAATAAGTATAAAAATATTAAACTTCCAG
ATTATCTAGGTTTCTTTGGAGGAAAACGTTTTGTTCCAATTATAACTTCTTTATACTCTTTAATTTTAGGTATTATATCA
GGATTTGTATGGCCTCCAATCCAAAATGTTATAAATAACTTTGGTAATGCAGTTGCAGGAGCTGGTGCTATTGGAGCATT
CTTCTTTGGATTATTTAATAGATTGTTGATTCCAACTGGATTACACCATATTATGAACACAATATTTTGGTTCCAATTTG
GTACATTTAAAAGTCCGTCAGGTACCATTGCTAATGGTGACTTAAAAAGATTCTTCGCTGGGGATCCTACTGCAGGAACT
TATATGACTGGATTCTTTGTAATAATGATGTTTGCTCTTCCTGCAGCCTGTTTTGCTATGATCAAAGCTGCTAGAGAAGA
AAATAAAAAAGCAGTTTCAGGTATGCTTTTAGGTTTAGCATTTACTGCATTCCTTACAGGAGTTACTGAACCAATAGAAT
TTACATTTATGTTTATTTCTCCTGTTCTTTATGCAATACATGCTTTGTTGACTGGTATAGCTCTCGCCCTTACATCAAGC
TTAGGAATAAAATGTGGATTTGGATTTTCTGCAAGTCTTATAGATTATGGTCTTAACTTTGGTATATCAACTAAACCACT
ACTTATAATTCCCATAGGTTTAATATTTGCAGCAATCTATTATTTCCTATTCTTATTCTTTATAAAAAAATTCAATTTAC
CTACACCAGGAAGAGAAGCAGATTCAGAAGTTAATACAAATATTAATGTTGACACTACTAAGAAAAGTGGACACTCTAAA
TTAGAAGATAAAGCTAAAGAAATATTAAAAGCTATAGGCAATTCTGATAATATTGAATCTATAGATGCTTGCGTAACTAG
AATAAGACTTGTTGTTTTTGATGGAAGCAAAATAAATGAAGCCAAACTTAAGGAATTAGGCGCTAATGGAATTATGAAGC
TTGATGATAAAAATTTCCAAATAGTAGTTGGTACTATAGCTGATCCTTTAGTATCTCAAATGAAACTATTAATGAAAAAA
TAA

Protein sequence :
MAKNSKFLSKIQRLGKSLMTPIAVLPAAALLLRLGQPDIWSWAGSLPSGIPWMSTAGAAIFDNLSLIFAIGIAVGLAEEN
NGVAAISATVGFLVLTKVSLKFDDTINMGVLSGIIVGILSASLYNKYKNIKLPDYLGFFGGKRFVPIITSLYSLILGIIS
GFVWPPIQNVINNFGNAVAGAGAIGAFFFGLFNRLLIPTGLHHIMNTIFWFQFGTFKSPSGTIANGDLKRFFAGDPTAGT
YMTGFFVIMMFALPAACFAMIKAAREENKKAVSGMLLGLAFTAFLTGVTEPIEFTFMFISPVLYAIHALLTGIALALTSS
LGIKCGFGFSASLIDYGLNFGISTKPLLIIPIGLIFAAIYYFLFLFFIKKFNLPTPGREADSEVNTNINVDTTKKSGHSK
LEDKAKEILKAIGNSDNIESIDACVTRIRLVVFDGSKINEAKLKELGANGIMKLDDKNFQIVVGTIADPLVSQMKLLMKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0067 AAM75272.1 EF0067 Not tested Not named Protein 3e-56 41