Gene Information

Name : CLM_2673 (CLM_2673)
Accession : YP_002804824.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Unknown
Product : DNA polymerase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : 2.7.7.7
Position : 2687749 - 2689716 bp
Length : 1968 bp
Strand : -
Note : identified by match to protein family HMM PF00476

DNA sequence :
ATGACTACACTTGCTATAGATGTTGAAACATATAGCAGTATAGATATTAAAACTTCGGGGGCCTACAAATATTGTGAGGC
TCCTGATTTTGAAATATTATTATTTGCTTATGCTTTCAATGATGAACCAGTACAAATTGTAGATTTCACTCAACATGAAG
CATTACCACAAAGAGTTATAGATGCACTTTATGATCCTGATGTAATTAAAACTGCATTTAATGCAAATTTTGAAAGAAGT
GCTATAAAATTTGGTGTGTCTAGCCTACCGTGCCCACCTGGGCAATGGGAATGCACAATGATAAAAGCTTTAACACTAGG
GCTACCAAGCTCCCTTGATATGGTTGGTAAGGCTTTAAAGCTTGAAGAAGATAAGCAAAAGATGAAAGAGGGTAAAGCAT
TAATACAATATTTTTGTAAGCCTTGTAAACCTACTAAAACAAATGATAAGAGAACCAGGAATCTTCCAAAACATGATATG
GAGAAATGGGAAACTTTTAAAGAATACTGTAAGCGAGATGTTGAAGTAGAAAGAGAAATAAGAAATTTATTAAATAGATA
TGAAACTAAAGCAGAAGAACAAAAATTATGGCAGCTGGACCAACACATAAATGATAGAGGTATTGATACTGATTTAATAC
TTATAAAGCAGGCTATTGAATGTGATACAAACTATACTGAAAGATTAACAAAAGCTGCTATTAAACTTACAGGACTTGAA
AATCCAAATAGTCCTACACAAATAAAAAAATGGATTGGTGAAAGGCTTGGAAGAGAGGTAAAGTCATTAACTAAAACAAG
TATTCCAGGACTTATAGAAGAAGCCAAGGATTTAAATAAAAGCGAAGTTATAAAAATGTTAGAACTAAGGCAACTAATGG
CCAAGACTTCTATTAAGAAATATGACACAATGCAAAATGCAAGATGTAAAGATGGTAGAGTAAGAGGTTTATTACAATTC
TATGGAGCTAACAGGACAGGCAGATGGGCAGGAAGATTAGTTCAAGTACAAAACTTACCTCAAAATCATTTACCTGATCT
AGACAATGCTAGGAATTTTGTTAGAGAGGGAAAATTTGAAGAAGTAGAATTTTTATTTGATAGTGTTCCGGATACATTAA
GTCAATTAATAAGAACAGCCTTTATACCTAGAGAAGGTAATAGATTTATAGTATCAGACTTTAGTGCTATAGAAGCTAGG
GTTATAGCGTGGTTTGCCGGGGAGCAATGGAGATTAGATGTTTTTAGTACTCATGGAAAGATATATGAAGCTTCAGCTAG
TCAAATGTTTAAAGTTCCAATAGAAAGCATAAAAAAGGGTTCAGAGTTAAGGCAAAAGGGAAAAATAGCAGAATTGGCAC
TTGGATATGGTGGAAGTGTTGGGGCTCTTAGTTCAATGGATAGAAAAAAGAGTATTCCAGAGGAAGAACTTCCCGGACTA
GTTAAAAGTTGGCGAAATGCTAATCCTAATATAACTAAATTTTGGTGGGATGTAGACAAGGCTGCTAAAAAGGCTATAAG
AGAAAGAACTACAGTAAATTTGCAATATGGACTTAAATTTATATATGATCCAGGAGTTTTATTTATACAACTACCTAGTG
GAAGAAAGCTAAGTTATATAAGGCCAAAGATAGAACCGCATGAAACTTTTAGTGGGGATAAAATTACCTATGAAGGTATG
GAACAAACATCTAAGCAATGGAAAAGAATAGATACTTATGGTCCTAAACTAGTGGAGAATATAGTACAAGCTACATCTAG
AGATTGTTTAAGAGAAGCTATGTTTAGAGTAAATAAAGAAGGATATGACATAGTAATGCATGTGCATGATGAAGTTGTAT
TAGATATACCAAAAGATAGGGCTACGGTTAAAGAAATAAATGAATTAATGGGCCAGCCAATAAAGTGGGCTCCAGGATTA
CCTTTGAAAGCTGATGGTTATGAATGCAATTACTATATGAAAGATTGA

Protein sequence :
MTTLAIDVETYSSIDIKTSGAYKYCEAPDFEILLFAYAFNDEPVQIVDFTQHEALPQRVIDALYDPDVIKTAFNANFERS
AIKFGVSSLPCPPGQWECTMIKALTLGLPSSLDMVGKALKLEEDKQKMKEGKALIQYFCKPCKPTKTNDKRTRNLPKHDM
EKWETFKEYCKRDVEVEREIRNLLNRYETKAEEQKLWQLDQHINDRGIDTDLILIKQAIECDTNYTERLTKAAIKLTGLE
NPNSPTQIKKWIGERLGREVKSLTKTSIPGLIEEAKDLNKSEVIKMLELRQLMAKTSIKKYDTMQNARCKDGRVRGLLQF
YGANRTGRWAGRLVQVQNLPQNHLPDLDNARNFVREGKFEEVEFLFDSVPDTLSQLIRTAFIPREGNRFIVSDFSAIEAR
VIAWFAGEQWRLDVFSTHGKIYEASASQMFKVPIESIKKGSELRQKGKIAELALGYGGSVGALSSMDRKKSIPEEELPGL
VKSWRNANPNITKFWWDVDKAAKKAIRERTTVNLQYGLKFIYDPGVLFIQLPSGRKLSYIRPKIEPHETFSGDKITYEGM
EQTSKQWKRIDTYGPKLVENIVQATSRDCLREAMFRVNKEGYDIVMHVHDEVVLDIPKDRATVKEINELMGQPIKWAPGL
PLKADGYECNYYMKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SEQ_2073 YP_002747288.1 phage DNA polymerase Not tested ¥ÕSeq4 Protein 4e-151 52
polA YP_494120.1 phage related DNA polymerase family A Not tested ¥ÕSa2 Protein 8e-153 50
MW1425 NP_646242.1 DNA polymerase Not tested ¥ÕSa2 Protein 7e-153 50