Gene Information

Name : CLM_2670 (CLM_2670)
Accession : YP_002804821.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Virulence
Product : virulence-associated E domain-containing protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG5545
EC number : -
Position : 2683948 - 2686371 bp
Length : 2424 bp
Strand : -
Note : identified by match to protein family HMM PF05272

DNA sequence :
TTGGAAGCCTATAAAACAGAAGATAAGCCTAAGATTAAACATGACGGATCCATAGCTATAGCTACTGGAAAGAGTAGAAA
GGAAACTCATTGGAAAAATAAAAATATTTTATGGTCAGAGCTAGTTGATAAGTTATCTAATACTACAAGAACACCTGAAA
CTTATGCAGAGTATAAGAAAATGGCTAAAACTGAAAAGGATAATATTAAAGATGTAGGTGGATTTGTAGGTGGCGGCCTT
AAGAATGGTCGTAGAAAAGCAGAGAATGTCCAGAATAGAACATTATTAACTTTAGACTTAGACTACGTTAATGGTGATAT
ATGGTCAAGCATAGAGTTATTGTGGGACTTTTCGGTAGCTATGTATTCAACTCATACTCATGCAGCAGATAACCAAAGAT
TAAGGTTAGTAATTCCTCTAAATAGACCAGTACTTCCTGATGAATATCAAGCCATAGCCAGAATGATAGCCAGTGACTTA
GGCATAGATCAATTTGATGATACAACCTATGAACCTAGTAGGCTAATGTATTGGCCAAGTACTTCAAGTGATGGAGATTA
TATTTTTAAAATTCAGGATGAACCATGGTTAAACCCTGATGAGGTATTAGCTAGATATACTTTTGGGTGGCAAGATGTAA
GTTATTGGCCAGAGAGTTCAAGAGCTAGGGCAAAATTAAATAATGCAATAAAGAAGCAAGAGGACCCGTTAGAAAAGAAA
GGTATTATAGGGGCATTTTGTAGGACCTATACAATAACTGAAGCTATAGCAGAATTTTTAAATGATATTTATGTTCCTGG
TGTAGATGAAACTAGATACACATATGCAGAAGGTTCAACAACTGGCGGGGTTGTGTTATATGAAAATAAATTTAGTTATA
GTCATCATGGTACGGATCCAGCTAGTAATACTCTATGTAATTCCTTTGACCTAGTTAGAATTCACAAGTTTGGTTATTTA
GATGATGAAGCCAAGCCAGATACTCCAGCTAATAGAATGCCGTCCTTTACTAGAATGAGTGAGTTTGCTAGTTCTGATGA
AAAAGTAATGCAGACTTTAGGAAAAGAAAGAATGGAAAAAGCTCAAGAGGATTTTGGGATTGTTGAAACTGAGGAAGTAG
ATACAGAGTGGTTAAAAGAAATTACTTACACAGAACAAGGCAAGGTAAGAAGTACTATTAGTAACTTTTTATTAATAATA
GAAAATGATCCAATGCTTAAAGATAAGATAGCTTATAATGAGTTTTCTAACAGAGCTGTAGTTATTGGCCAACTTCCTTG
GAGAAAAAAAGATAATATATCAGATTGGAACGATACAGATGATAGTGGATTAAGAGAATTTATTGAGAAATATTACAGTA
TTTCAAGTACTGCAAAATGTGCTGATGCTTTAGCATTAGTTTTTGAAAAACATTCATTTCATCCTATTAAAGAATATTTA
AATAGTCTTAAATGGGATGGTAAAGAGAGAATAAACACTTTATTAATAGATTATCTAGGTGCAGAAGATAGTAATTATGT
AAAAACAGTTACAAGGAAAACACTAGTAGGAGCAGTAGCAAGAATTTTTATTCCAGGAATTAAATTTGATACTATGCTTG
TTTTAAGTGGACCACAGGGAATAGGTAAAAGTACTATAATAAAAAAACTAGGTAAGGATTGGTATAGTGATAGTTTAACA
ACCGTAAGTGGTAAAGAAGCTTATGAACAACTTCAAGGTTTTTGGTTAATTGAAATGGGAGAAATGACAGCAACTAAAAA
AGCAGATATTGAAGCAACAAAACATTTTTTATCTAAACAAGAGGATATTTACAGAGTGGCTTATGGTAGAAGGACAAGCC
GTTTCCCAAGACAATGTATATTTATAGGTACTACTAATGATAAGGAATTTTTAAGAGATAAAACAGGTTCTAGAAGGTTT
TGGCCAGTTGATGTAGGTACTCAAAAACATAATAAATATGTATGGAGTGATTTAACAGACTATGAAATCAATCAAATATG
GGCTGAAGCTGTAGAGTTATGGAAAAACAAAGAACCTTTAAACTTAAATGATGAAGAGAAAAAAGAAGCCGAAAAACAGC
AAGATGCACACAGTGAAGAAAGTGCAAAAACTGGATTAATTGAAGAATATCTTAACAAACCATTGCCAGATGATTGGTAT
AGTTTAGGATTATCTGAGAGGAGAAATTATATACAAGGTTCTGACTTCGGAGAAATTCCAGAGGGCAATTTAAGGCGAGA
TAAAACATGTGTTATGGAAATATGGGTAGAACTCTTTAATGGAGATCCTAAGCAACTTACACCATTACACAGTAGAGAAA
TTAACGATATTTTGAAAAGTCTTAAAGATTGGGAAAGAAATAATAGCTCTTTAAGATTTGGGAAAATTTATGGTAAACAA
AGGGCTTATATACGAAAAATTTAA

Protein sequence :
MEAYKTEDKPKIKHDGSIAIATGKSRKETHWKNKNILWSELVDKLSNTTRTPETYAEYKKMAKTEKDNIKDVGGFVGGGL
KNGRRKAENVQNRTLLTLDLDYVNGDIWSSIELLWDFSVAMYSTHTHAADNQRLRLVIPLNRPVLPDEYQAIARMIASDL
GIDQFDDTTYEPSRLMYWPSTSSDGDYIFKIQDEPWLNPDEVLARYTFGWQDVSYWPESSRARAKLNNAIKKQEDPLEKK
GIIGAFCRTYTITEAIAEFLNDIYVPGVDETRYTYAEGSTTGGVVLYENKFSYSHHGTDPASNTLCNSFDLVRIHKFGYL
DDEAKPDTPANRMPSFTRMSEFASSDEKVMQTLGKERMEKAQEDFGIVETEEVDTEWLKEITYTEQGKVRSTISNFLLII
ENDPMLKDKIAYNEFSNRAVVIGQLPWRKKDNISDWNDTDDSGLREFIEKYYSISSTAKCADALALVFEKHSFHPIKEYL
NSLKWDGKERINTLLIDYLGAEDSNYVKTVTRKTLVGAVARIFIPGIKFDTMLVLSGPQGIGKSTIIKKLGKDWYSDSLT
TVSGKEAYEQLQGFWLIEMGEMTATKKADIEATKHFLSKQEDIYRVAYGRRTSRFPRQCIFIGTTNDKEFLRDKTGSRRF
WPVDVGTQKHNKYVWSDLTDYEINQIWAEAVELWKNKEPLNLNDEEKKEAEKQQDAHSEESAKTGLIEEYLNKPLPDDWY
SLGLSERRNYIQGSDFGEIPEGNLRRDKTCVMEIWVELFNGDPKQLTPLHSREINDILKSLKDWERNNSSLRFGKIYGKQ
RAYIRKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1408 NP_646225.1 hypothetical protein Not tested ¥ÕSa2 Protein 0.0 49
SAUSA300_1410 YP_494107.1 virulence-associated protein E Virulence ¥ÕSa2 Protein 0.0 49
SAOV_0312 YP_005735829.1 virulence-associated protein E Virulence ¥ÕSa1 Protein 0.0 49
SH1781 YP_253696.1 hypothetical protein Not tested ¥ÕSh1 Protein 0.0 48