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Name : serS (CLM_0022) Accession : YP_002802328.1 Strain : Clostridium botulinum Kyoto Genome accession: NC_012563 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 22539 - 23819 bp Length : 1281 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGATTTAAAAAGAATAAGAAATAATTCAAATGAAATAAAAGAAGCATTAAACAATAGAGGAGAAAAGTTTGATGT AACTGTAATTGATGAAGTTTTAAAATTAGATGAAGAAAGAAGAAATATTTTAGTTAAAGTTGAGGTTTTAAAAAGTAAGA GAAATAAAGTTTCTTCTGAAGTTCCTAAATTAAAAAAAGAAGGAAAAGATGTATCTAATATAGTAGCTGAAATGAAGAAT TTATCAGAAGAGATAAAAGGATTTGATGTTACTTTAGCTAAAATAGATGAAAAAATACAATATATAATGCTTAGAATACC TAATATACCCAACCCACAAGTTCCAGATGGAGAAACAGATGAGGATAATATAGAAATAAGAAATTGGCTGGAACCAACAA AATTTGATTTTGAACCTAAAGCACATTGGGATATAGGAACAAATTTAAATATTCTTGATTTTGAAAGAGCTGGAAAAGTA ACAGGATCAAGATTTACTTTTTATAAAGGATTAGGGGCTAGATTAGAAAGAGCAGTAATATCTTATTTTTTAGATACTCA TACAGAAAAACATGATTATACTGAAATATTACCACCTTATATGGTAAATAGAACAAGTATGATAGGAACAGGACAATTAC CTAAATTTGAAGAAGACGCTTTTAAAATCTCAGAGGATGATTACTTCTTAATACCAACTGCAGAGGTTCCTGTAACTAAT TTATATAGAGATGAAATCTTAAAAGGTGATGAATTACCATTAAAACATGTAGCTTATAGTGCTTGTTTTAGATCAGAAGC AGGTTCAGCAGGTAGAGATACAAGAGGTCTTGTTAGACAACATCAATTTAATAAAGTAGAGCTTGTTAAATTTACAAAAC CAGAACAATCCTATGAAGAATTGGAAAAATTAACTAATGATGCTGAAACAGTATTAAAAGAGTTGGGTATTCCATATAGA GTTGTAAGAATATGCAAAGGTGATTTAGGATTTACAGCTGCATTAAAATATGATTTAGAAGTTTGGATGCCAAGTTACAA TAGATATGTTGAAATATCAAGCTGTAGTAACTTTGAAGACTTCCAAGCAAGACGTGCTAATATAAGATATAAAGAAGATG CAAAAGCAAAACCACAATATGTTCATACATTAAATGGATCAGGAGTTGCTATTGGAAGAACTGTTGCAGCTATACTTGAA AACTATCAAAGTGAAGATGGATCAGTTACAATACCAGAAGTGTTAAGACCTTATATGGGAGGAAGAGAAGTAATAAAATA A Protein sequence : MLDLKRIRNNSNEIKEALNNRGEKFDVTVIDEVLKLDEERRNILVKVEVLKSKRNKVSSEVPKLKKEGKDVSNIVAEMKN LSEEIKGFDVTLAKIDEKIQYIMLRIPNIPNPQVPDGETDEDNIEIRNWLEPTKFDFEPKAHWDIGTNLNILDFERAGKV TGSRFTFYKGLGARLERAVISYFLDTHTEKHDYTEILPPYMVNRTSMIGTGQLPKFEEDAFKISEDDYFLIPTAEVPVTN LYRDEILKGDELPLKHVAYSACFRSEAGSAGRDTRGLVRQHQFNKVELVKFTKPEQSYEELEKLTNDAETVLKELGIPYR VVRICKGDLGFTAALKYDLEVWMPSYNRYVEISSCSNFEDFQARRANIRYKEDAKAKPQYVHTLNGSGVAIGRTVAAILE NYQSEDGSVTIPEVLRPYMGGREVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-128 | 61 |
