Gene Information

Name : CLM_1826 (CLM_1826)
Accession : YP_002804007.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Resistance
Product : putative lantibiotic biosynthesis regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1855795 - 1856454 bp
Length : 660 bp
Strand : +
Note : identified by similarity to SP:P33112; match to protein family HMM PF00072; match to protein family HMM PF00486

DNA sequence : 
ATGTCAAAAATACTTGTAATTGATGATGAAGAAGATATTTTGATTCTTATTAAAAATGTTCTTTCCAAAGATAATCATTT
AGTAACTACAGTAAAAGAAGCAAAAGATATTCCATTAAATGATTTTGTAAAATTTGATTTGATTTTACTTGATGTAATGA
TGCCTGATATTGATGGTTTTACTTTATGTAAGGAAATTAGAGAGATTGTAGACTGTCCAATTCTTTTCTTAACAGCAAAA
ACTATGGAAAGTGACATTATGTTTGGATTAGGAATTGGTGGGGATGATTATATAACAAAACCTTTTGGAGTAGGAGAATT
AAGGGCTAGAGTAAATGCTCATCTGCGCAGGGAACATCGTGAAAAACGTCATATTTTTGTAGCTTCAGATATTATATTTA
ATCTATCCAGTAAGGAAATTAAAATAGGCGATGTAAAGGTGCCCTTTACAAAGGGTGAATATACTATATGTGAATACCTT
GCAAGAAATTCAGGACAGGTGTTTTCTAAAGAACAAATATATGAAGCGGTTTATGGGTATGATGGAGAAAGTGATAGCTC
TGCTATTACAGAGCATATTAAAAATATTAGAGCCAAGTTAAAAGTCTTTGATATGTCACCAATAGAAACAGTCTGGGGGA
TTGGTTATAAATGGGTATAA

Protein sequence : 
MSKILVIDDEEDILILIKNVLSKDNHLVTTVKEAKDIPLNDFVKFDLILLDVMMPDIDGFTLCKEIREIVDCPILFLTAK
TMESDIMFGLGIGGDDYITKPFGVGELRARVNAHLRREHREKRHIFVASDIIFNLSSKEIKIGDVKVPFTKGEYTICEYL
ARNSGQVFSKEQIYEAVYGYDGESDSSAITEHIKNIRAKLKVFDMSPIETVWGIGYKWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0907 YP_001198273.1 NisR Not tested 89K Protein 2e-35 46
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 5e-35 42
nisR YP_006309898.1 NisR Not tested FWisland_1 Protein 1e-39 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLM_1826 YP_002804007.1 putative lantibiotic biosynthesis regulatory protein BAC0596 Protein 2e-23 41
CLM_1826 YP_002804007.1 putative lantibiotic biosynthesis regulatory protein CP000034.1.gene2186. Protein 3e-24 41
CLM_1826 YP_002804007.1 putative lantibiotic biosynthesis regulatory protein CP001138.1.gene2239. Protein 2e-23 41
CLM_1826 YP_002804007.1 putative lantibiotic biosynthesis regulatory protein NC_002695.1.916589.p Protein 3e-24 41
CLM_1826 YP_002804007.1 putative lantibiotic biosynthesis regulatory protein BAC0039 Protein 3e-24 41