Gene Information

Name : CLM_1823 (CLM_1823)
Accession : YP_002804004.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Virulence
Product : antibiotic ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 1853491 - 1854198 bp
Length : 708 bp
Strand : +
Note : identified by similarity to GB:AAF99691.1; match to protein family HMM PF00005

DNA sequence :
ATGGAAAAATATATTTTACAAACAAAAGATCTTTGTAAAGTTTTTAAAGGTCAGCATGCAGTAAACAATATTTCAATTAC
AGTGAAAGAGAATTCTGTGTACGGATTATTAGGCCCTAATGGGGCAGGAAAATCTACTATGTTAAAAATGTTAACAGGAA
TGTTACGTCCCACATCCGGGAAAATTATATTTGATAATCATCATTGGACTAGGAAGGATTTAGTGAGTATTGGTGCTCTT
ATTGAAGCTCCCCCACTTTATGAAAATTTAACTGCAAGAGAAAATTTAAAAGTACGTACTACTCTTTTAGGATTAAAGGA
TTCACGAATTGATGAAGTATTAAAAATTGTTGATTTAACCAATACAGGTAAAAAAACTGCTGGTAAGTTTTCAATGGGTA
TGAAACAGCGTTTAGGAATTGCCATTGCTCTACTTAACAATCCTAAACTATTGATATTAGATGAACCAACAAATGGTCTT
GATCCTATTGGTATTCAAGAATTACGTGAATTAATTAGATCATTTCCCAGACAAGGAATAACAGTTATTTTATCTAGTCA
TATTTTAGCAGAGGTTCAGCTTATTGCAGACCACATTGGAATTATAAGTAATGGGATGTTAGGATATGAAGCAAAAATTA
ATCCTTCAGAGAATTTAGAAACACTCTTCACAGAAGTAGTAAAAAAGAATAAAAAAAGGAGGGCATAA

Protein sequence :
MEKYILQTKDLCKVFKGQHAVNNISITVKENSVYGLLGPNGAGKSTMLKMLTGMLRPTSGKIIFDNHHWTRKDLVSIGAL
IEAPPLYENLTARENLKVRTTLLGLKDSRIDEVLKIVDLTNTGKKTAGKFSMGMKQRLGIAIALLNNPKLLILDEPTNGL
DPIGIQELRELIRSFPRQGITVILSSHILAEVQLIADHIGIISNGMLGYEAKINPSENLETLFTEVVKKNKKRRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epiF YP_186701.1 epidermin immunity protein F Virulence vSa¥â Protein 1e-43 51
bsaF NP_646577.1 hypothetical protein Not tested vSa¥â Protein 1e-43 51
epiF YP_494453.1 lantibiotic epidermin immunity protein F Not tested vSa¥â Protein 1e-43 51
bsaF YP_001332745.1 lantibiotic immunity protein F Not tested vSa¥â Protein 1e-43 51
sboF YP_006309913.1 SboF Not tested FWisland_1 Protein 3e-43 51
cdd4 CAA63569.1 - Not tested PaLoc Protein 3e-44 49
SPN23F_09830 YP_002510959.1 lantibiotic transport ATP-binding protein Not tested PPI-1 Protein 3e-33 44
CD241_0087 YP_005124356.1 ABC transporter ATP-binding protein Not tested Not named Protein 2e-40 43
DIP0090 NP_938487.1 ABC transporter ATP-binding protein Not tested Not named Protein 9e-41 43
SE0094 NP_763649.1 ABC transporter ecsA-like protein Not tested SCCpbp4 Protein 4e-28 41
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 3e-31 41