Gene Information

Name : rbsK (CLM_1805)
Accession : YP_002803986.1
Strain : Clostridium botulinum Kyoto
Genome accession: NC_012563
Putative virulence/resistance : Unknown
Product : ribokinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0524
EC number : 2.7.1.15
Position : 1836176 - 1837087 bp
Length : 912 bp
Strand : +
Note : identified by match to protein family HMM PF00294; match to protein family HMM TIGR02152

DNA sequence :
ATGGATATTGCAGTTATTGGTTCAAATATGGTAGATTTGATAAGTTATATTGATAGAATGCCTAAAGAAGGTGAGACTTT
AGAAGCACCAGATTTTAAAATGGGATTTGGGGGTAAGGGAGCAAACCAGGCCGTTACAGCTGCAAGATTAAAATCAGATG
TTATGATGGTAAGTAAAGTTGGAGATGATTTATTTGGACAAAACACTATTAAAAATTTTAAAAACAATGGTGTAAATACA
GATTTTGTAACTGTTCAAAAAAATCAAGCTAGTGGAGTTGCACCTATTTTTGTTGATAGAGAATCTAAAAATAGTATTTT
AATTATTAAAGGTGCCAATAAAAATTTATCTCCTACAGATATAGATGATGCAAGTGAAGAATTGAAAAAGTGTTCTTTAA
TTATTTTACAATTGGAAATTGAATTAGAAACTGTTTATTATGCTATAGATTTTGCTAATAAGAATAATATTTCTGTATTG
TTAAATCCTGCGCCTGCTACAAAAGAACTTGATTTCAATTATGTTTATAAGTGCGATTTTTTTGTTCCAAATGAAACAGA
ATTAGAGATTTTAACAAATAAATCTGTAAATACAATAGGAGAGATAAAAGAAGCTGCTCATTTAATTGGGGATAAAGGTG
TTAAAAATGTAATTGTTACAATGGGCAGTAAAGGTTTACTGTGGATTAATAAAGATGAAGAACATTTTATAAAAGCACGT
AAAGTTGATGCCGTGGATACCACTGGTGCTGGTGATGGATTTATTGGATGTTTTGCACATTATTATGTAGCCACAAAAAA
CATATTATTAGCTCTTGAAAAAGCAACAGCTTATGCAGCACTTAGTGTTACAAGATATGGTACTCAAACTTCTTATCCTA
CAAAGGAGGAGTTTGAAGAATTTTTAAAATAA

Protein sequence :
MDIAVIGSNMVDLISYIDRMPKEGETLEAPDFKMGFGGKGANQAVTAARLKSDVMMVSKVGDDLFGQNTIKNFKNNGVNT
DFVTVQKNQASGVAPIFVDRESKNSILIIKGANKNLSPTDIDDASEELKKCSLIILQLEIELETVYYAIDFANKNNISVL
LNPAPATKELDFNYVYKCDFFVPNETELEILTNKSVNTIGEIKEAAHLIGDKGVKNVIVTMGSKGLLWINKDEEHFIKAR
KVDAVDTTGAGDGFIGCFAHYYVATKNILLALEKATAYAALSVTRYGTQTSYPTKEEFEEFLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoK ADD91722.1 deoxyribokinase DeoK Not tested PAI-I AL862 Protein 1e-81 65
unnamed CAE85173.1 hypothetical protein Not tested PAI V 536 Protein 2e-81 65
ORF4 AAK27331.1 unknown Not tested PAI-I AL862 Protein 3e-75 62