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Name : CLM_1206 (CLM_1206) Accession : YP_002803417.1 Strain : Clostridium botulinum Kyoto Genome accession: NC_012563 Putative virulence/resistance : Resistance Product : ABC transporter ATP-binding protein/permease Function : - COG functional category : V : Defense mechanisms COG ID : COG1132 EC number : - Position : 1249191 - 1250993 bp Length : 1803 bp Strand : + Note : identified by match to protein family HMM PF00005; match to protein family HMM PF00664 DNA sequence : ATGAACAAGAAAAAGAAAGGTATTCCAAGGCTATTGGAAATAGCTGGAGAAAAGCGAGGGCTACTTATTTGCTCATCCAT ATTTTCAGCTATCAGTGCAATTTTAATGCTATTACCATATATAGCGGTTTATTTTATAATGGCGGAACTTTTAAAAAATG CTGCAAACCCTAGAAATGTTAATTCTACACAAATGCTACACTGGGGTACTGTTGCTCTTGTAGGATTGGTAGGAGGAATT GTTTTCATGTATATATCTGGGTTAATGTCTCATACAGCAGCATACAGGATATTATATAGCTTAAGAGTTCGTATGTCAGA GCATATTGGTAAATTACCTCTAGGCTATTTAAGCAACACATCAACGGGTATAGTAAAGAAAACCTTTGAACAAAATGTAG AAAAGATTGAAGCCTTTGTTGCTCACCAGTTACCGGATATGGTAAATGTATTTGTAACAATGATTATTACAATAATTATG ATGCTAACTTTAAATCCATGGCTTACATTGGCTGCTATGGTACCACTTGTTTTGGGATTCTTAATACAGATGAAAAAAAG AAGTGGTAAGGCTGCAGAGGAAAGTGCAAAAAAATACTATAATGCCTTAGAGAGAATCAACTCATCAACTATTCAATATG TGAAAGGAGTGCCTGCTGTAAAGATATTTGGTAGAAACGTATATTCTTTTCGCAAATTTTATGATGATATGATATCTTAC AGAGATTATTGTGTAAAGTATACAGATCAGTATCAAAATACCTATATAACTTCAAAGGTATTATTAAATTCAACTTTAAC ATTTATATTACCAGTGGGTATTCTTTTAATGGGAGGAAGATTAGGAGATCTTTCCTTTGTACAAACTCTTTTATTTTTTA TTATTTTAGCACCAGGAGTTGCGTCACCTATGTTGCGTTTTATGACTTTTGCATCTTCATTAGGAGATATTTCTGAGGGA GTTCAGCGTATTGATAAGATCTTTGCTGAGAAAACTATTTGTGAGGCAAAGAATCCTAGGATACCTTCCTCTTATGATAT TGAGTTTGATAATGTGTCCTTTTCTTATGAGTCTGAGGACACATCCACTAGGAAAGAAGCATTATCAAAAGTAAGTTTTA AGGCGAAAAAAGGTTCATGTACAGCACTTGTAGGACCTTCAGGTTCTGGAAAATCTACAGTGGCTAACCTTATTCCACGT TTTTGGGATATTCAAAAAGGTCATATTAGAATCGGTGGAATAGATATTAAAGAAATTTCTACAGAGAATTTGATGGATTT AGTTTCCTTTGTTTTTCAAGATACATTTTTATTTCATGATACCTTATATGAAAATATCCGTGTAGGCAGACCAGATGCCA CAAAGGAAGAAATATTTAAGGCTGCAAAAGCTGCTCAGTGTCATGAGTTTATTACAGGACTTGAAAATGGTTATGACACT ATTGTTGGTGAAGGAGGCACTCATCTTTCAGGTGGTGAAGAACAAAGAGTATGTGTGGCAAGAGCAATTTTAAAAAATTC TCCTATACTAGTTTTAGATGAAGCTACTGCTTTTTCAGATCCAGAAAATGAGTATCATATGCAGATGGCTTTAAGGGAGC TTATGAAGAATAAAACTGTTATTATGATTGCACATAGGCTAACAACTATTAAAGATGCTGAAAATATAGTGGTTATGGAA GATGGAACTATTGTAGAGACGGATACTCATGATGTACTTATAAATAAAGATGGATTGTATAAAAAGCTTTGGAATTCATA TACAGTGGCCTCTAATTGGGGTATAAGTAAAGGAGGGATTTAG Protein sequence : MNKKKKGIPRLLEIAGEKRGLLICSSIFSAISAILMLLPYIAVYFIMAELLKNAANPRNVNSTQMLHWGTVALVGLVGGI VFMYISGLMSHTAAYRILYSLRVRMSEHIGKLPLGYLSNTSTGIVKKTFEQNVEKIEAFVAHQLPDMVNVFVTMIITIIM MLTLNPWLTLAAMVPLVLGFLIQMKKRSGKAAEESAKKYYNALERINSSTIQYVKGVPAVKIFGRNVYSFRKFYDDMISY RDYCVKYTDQYQNTYITSKVLLNSTLTFILPVGILLMGGRLGDLSFVQTLLFFIILAPGVASPMLRFMTFASSLGDISEG VQRIDKIFAEKTICEAKNPRIPSSYDIEFDNVSFSYESEDTSTRKEALSKVSFKAKKGSCTALVGPSGSGKSTVANLIPR FWDIQKGHIRIGGIDIKEISTENLMDLVSFVFQDTFLFHDTLYENIRVGRPDATKEEIFKAAKAAQCHEFITGLENGYDT IVGEGGTHLSGGEEQRVCVARAILKNSPILVLDEATAFSDPENEYHMQMALRELMKNKTVIMIAHRLTTIKDAENIVVME DGTIVETDTHDVLINKDGLYKKLWNSYTVASNWGISKGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| smi_1698 | YP_003446800.1 | multidrug ABC transporter ATPase/permease | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-115 | 43 |
