Gene Information

Name : dnaB (Avin_07680)
Accession : YP_002797989.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : -
Position : 725923 - 727314 bp
Length : 1392 bp
Strand : +
Note : unwinds double stranded DNA

DNA sequence :
ATGAACGACATCAGTCCCCCCGAGCAATACGACCTGGAAACCGCCGCCCTCAAGGTGCCGCCGCATTCCATCGAGGCCGA
GCAGGCCGTGCTGGGCGGCCTGATGCTGGACAACAACACCTGGGAGCGGGTGCTCGACCAGGTGTCCGACGGCGACTTCT
ACCGTCACGACCACCGCATGATCTTCCGCGCCATCACCGTACTGGCCGAGCGCAACATGCCGTTCGACGTGGTCACCCTG
TCCGAGCAACTGGACAAGGAGGGGCATCTGGAGCAGGTCGGCGGCCTGGCCTACCTGGGGGAACTGGCCAAGAACACGCC
CTCGGTGGCCAACATCAAGGCCTATGCGCAGATCGTCCGCGAGCGCGCCACCCTGCGTCAGTTGATCGCCACCAGCAACC
GGATCGCCGACAGCGCCTACGCGCCCCAGGGCCGCACCGGCGACGAGATCCTCGACGAGGCCGAGCGGCTGATCTTCCAG
ATCGCCGAGGCGCGGCCCAAGACCGGCGGGCCGATGGCGATCAACGACATCCTGGTCAAGGCCATCGACCGCATCGACTC
ACTGTTCAACTCCGGCGATGCCATCACCGGGCTGTCCACCGGCTTCACCGACCTGGACGAGCAGACCAGCGGCCTGCAGC
CGGCCGACCTGGTCATCGTCGCCGGGCGTCCGTCCATGGGCAAGACCACCTTCGCCATGAACCTGGTGGAGAACGCCGTG
CTGCGCAGCGACAAGGCGGTGGTGGTGTATTCCCTGGAAATGCCCGCCGAATCCATCGTGATCCGTATGCTCGCCTCGCT
CGGGCGCATCGACCAGACCAAGGTGCGCGCCGGCCGTCTGGACGACGACGACTGGCCGCGGCTGACCTCGGCGGTCAACC
TGCTCAACGAGCGCAAGCTGTTCATCGACGACACCGCCGGCATCAGCCCGGCGGAAATGCGCGCGCGTACCCGGCGCCTG
GCCCGCGAGCACGGCGAGATCGCCATGATCATGGTCGACTACCTGCAACTGATGCAGATTCCCGGTTCCGGCGGCGACAA
CCGGGTCAACGAGATTTCCGAGATATCCCGTTCGCTGAAGGCGCTGGCCAAGGAGTTCAACTGCCCGGTGATCGCGCTCT
CGCAGCTCAACCGCTCGCTGGAGCAGCGTCCCAACAAGCGTCCGGTGAACTCCGATCTGCGCGAATCCGGAGCCATCGAG
CAGGATGCCGATGTCATCATGTTCGTCTATCGCGACGAGGTCTATCACCCGGAGACGGAGTTCAAGGGGGTCGCCGAAAT
CATCATCGGCAAGCAGCGCAACGGCCCGATCGGTACCACCCGGCTGGCTTTCCTCGGCAAGTATTCGCGCTTCGAGAACC
TGGCGCCGGGCAGTTACCAGTTCGACGAGTGA

Protein sequence :
MNDISPPEQYDLETAALKVPPHSIEAEQAVLGGLMLDNNTWERVLDQVSDGDFYRHDHRMIFRAITVLAERNMPFDVVTL
SEQLDKEGHLEQVGGLAYLGELAKNTPSVANIKAYAQIVRERATLRQLIATSNRIADSAYAPQGRTGDEILDEAERLIFQ
IAEARPKTGGPMAINDILVKAIDRIDSLFNSGDAITGLSTGFTDLDEQTSGLQPADLVIVAGRPSMGKTTFAMNLVENAV
LRSDKAVVVYSLEMPAESIVIRMLASLGRIDQTKVRAGRLDDDDWPRLTSAVNLLNERKLFIDDTAGISPAEMRARTRRL
AREHGEIAMIMVDYLQLMQIPGSGGDNRVNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIE
QDADVIMFVYRDEVYHPETEFKGVAEIIIGKQRNGPIGTTRLAFLGKYSRFENLAPGSYQFDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 6e-120 57
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 4e-107 54
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 2e-101 51
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 5e-102 51
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 2e-101 51
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 2e-97 50
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 5e-81 45
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-92 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-92 45