|
Name : dnaB (Avin_07680) Accession : YP_002797989.1 Strain : Azotobacter vinelandii DJ Genome accession: NC_012560 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 725923 - 727314 bp Length : 1392 bp Strand : + Note : unwinds double stranded DNA DNA sequence : ATGAACGACATCAGTCCCCCCGAGCAATACGACCTGGAAACCGCCGCCCTCAAGGTGCCGCCGCATTCCATCGAGGCCGA GCAGGCCGTGCTGGGCGGCCTGATGCTGGACAACAACACCTGGGAGCGGGTGCTCGACCAGGTGTCCGACGGCGACTTCT ACCGTCACGACCACCGCATGATCTTCCGCGCCATCACCGTACTGGCCGAGCGCAACATGCCGTTCGACGTGGTCACCCTG TCCGAGCAACTGGACAAGGAGGGGCATCTGGAGCAGGTCGGCGGCCTGGCCTACCTGGGGGAACTGGCCAAGAACACGCC CTCGGTGGCCAACATCAAGGCCTATGCGCAGATCGTCCGCGAGCGCGCCACCCTGCGTCAGTTGATCGCCACCAGCAACC GGATCGCCGACAGCGCCTACGCGCCCCAGGGCCGCACCGGCGACGAGATCCTCGACGAGGCCGAGCGGCTGATCTTCCAG ATCGCCGAGGCGCGGCCCAAGACCGGCGGGCCGATGGCGATCAACGACATCCTGGTCAAGGCCATCGACCGCATCGACTC ACTGTTCAACTCCGGCGATGCCATCACCGGGCTGTCCACCGGCTTCACCGACCTGGACGAGCAGACCAGCGGCCTGCAGC CGGCCGACCTGGTCATCGTCGCCGGGCGTCCGTCCATGGGCAAGACCACCTTCGCCATGAACCTGGTGGAGAACGCCGTG CTGCGCAGCGACAAGGCGGTGGTGGTGTATTCCCTGGAAATGCCCGCCGAATCCATCGTGATCCGTATGCTCGCCTCGCT CGGGCGCATCGACCAGACCAAGGTGCGCGCCGGCCGTCTGGACGACGACGACTGGCCGCGGCTGACCTCGGCGGTCAACC TGCTCAACGAGCGCAAGCTGTTCATCGACGACACCGCCGGCATCAGCCCGGCGGAAATGCGCGCGCGTACCCGGCGCCTG GCCCGCGAGCACGGCGAGATCGCCATGATCATGGTCGACTACCTGCAACTGATGCAGATTCCCGGTTCCGGCGGCGACAA CCGGGTCAACGAGATTTCCGAGATATCCCGTTCGCTGAAGGCGCTGGCCAAGGAGTTCAACTGCCCGGTGATCGCGCTCT CGCAGCTCAACCGCTCGCTGGAGCAGCGTCCCAACAAGCGTCCGGTGAACTCCGATCTGCGCGAATCCGGAGCCATCGAG CAGGATGCCGATGTCATCATGTTCGTCTATCGCGACGAGGTCTATCACCCGGAGACGGAGTTCAAGGGGGTCGCCGAAAT CATCATCGGCAAGCAGCGCAACGGCCCGATCGGTACCACCCGGCTGGCTTTCCTCGGCAAGTATTCGCGCTTCGAGAACC TGGCGCCGGGCAGTTACCAGTTCGACGAGTGA Protein sequence : MNDISPPEQYDLETAALKVPPHSIEAEQAVLGGLMLDNNTWERVLDQVSDGDFYRHDHRMIFRAITVLAERNMPFDVVTL SEQLDKEGHLEQVGGLAYLGELAKNTPSVANIKAYAQIVRERATLRQLIATSNRIADSAYAPQGRTGDEILDEAERLIFQ IAEARPKTGGPMAINDILVKAIDRIDSLFNSGDAITGLSTGFTDLDEQTSGLQPADLVIVAGRPSMGKTTFAMNLVENAV LRSDKAVVVYSLEMPAESIVIRMLASLGRIDQTKVRAGRLDDDDWPRLTSAVNLLNERKLFIDDTAGISPAEMRARTRRL AREHGEIAMIMVDYLQLMQIPGSGGDNRVNEISEISRSLKALAKEFNCPVIALSQLNRSLEQRPNKRPVNSDLRESGAIE QDADVIMFVYRDEVYHPETEFKGVAEIIIGKQRNGPIGTTRLAFLGKYSRFENLAPGSYQFDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 6e-120 | 57 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 4e-107 | 54 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-101 | 51 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 5e-102 | 51 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 2e-101 | 51 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 2e-97 | 50 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 5e-81 | 45 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-92 | 45 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-92 | 45 |
