Gene Information

Name : ribD (Avin_06710)
Accession : YP_002797897.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 638516 - 639601 bp
Length : 1086 bp
Strand : +
Note : -

DNA sequence :
ATGGCCCGTGCCCTGGAGCTGGCCCGCCAGGGACTGTATTCCACCCACCCCAATCCGCGGGTCGGCTGCGTGATCGTCGC
CGCCGGCAGGATCGTCGGCGAAGGCTGGCACGTGCGCGCCGGCGAGCCGCACGCCGAGGTCCACGCCCTGCGCCAGGCCG
GTGAGACGGCGCGCGGTGCCACCGCCTACGTCACCCTGGAGCCCTGCAGCCACCACGGGCGCACGCCACCCTGCGCCGAG
GCGCTGGTCGCCGCCGGGGTCGGTCGGGTGGTGGCGGCCATGCAGGACCCCAATCCGCAGGTGTCCGGGCGCGGCCTGGC
GCGTCTGCGCCAGGCCGGTATCGAGGTCGAGGTCGGTGTGCTGGAGGCCGAGGCGCGTGCGCTCAACGCCGGTTTCGTCA
AGCGCATGGAGCACGGTCTGCCGTTGGTACGGGTCAAGTTGGCGATGAGCCTGGACGGCCGCACGGCGATGGCCAGCGGC
GAGAGCCAGTGGATCACCGGCGCGCCGGCGCGCGCCGCCGTGCAGCGCCTGCGCGCCCGTTCCAGCGTGGTGCTGACCGG
CGCCGACACCGTTCTCGTCGACCATGCCCGGCTCACCGTGCGCGGCGAGGAGCTGGGGCTGGCGCCCGAACAGGTCGCCC
TGGCGCTGCAGCGTCCGCCGCTGCGCGTGCTGGTCGACGGGCGCCTGCGGGTGCCGCTGGATGTGCCCTTCTTCCAGGCC
GGGCCGGCGCTGGTGGCGACTGTTTCGGCCGAACGCGAGGTGGATTACCGGGCGGCCGGCCACGAGTTGCTGGCCGTGCC
GGGCGAGGACGGCCGGGTCGATCTGCCGGCGCTGCTGGCCGAGCTGGCCGCGCGTGGGGCCAACGAGGTGCTGGTGGAGG
CCGGTCCGCGTCTGGCCGGGGCCTTCGCCCGGCAGGGACTGGTCGACGAGTACCGTCTGTTCGTCGCGCCCAAGTTTCTC
GGCTCGACTGCCCGGCCCCTGCTGGAGCTGCCCCTGGAGCGCATGGCCGAGGCGCGCGAGCTGAAGATCCGCGACATCCG
CGCGGTGGGCGAGGATTGGCAGATCGTCGCCGTGCCCGCGACCTGA

Protein sequence :
MARALELARQGLYSTHPNPRVGCVIVAAGRIVGEGWHVRAGEPHAEVHALRQAGETARGATAYVTLEPCSHHGRTPPCAE
ALVAAGVGRVVAAMQDPNPQVSGRGLARLRQAGIEVEVGVLEAEARALNAGFVKRMEHGLPLVRVKLAMSLDGRTAMASG
ESQWITGAPARAAVQRLRARSSVVLTGADTVLVDHARLTVRGEELGLAPEQVALALQRPPLRVLVDGRLRVPLDVPFFQA
GPALVATVSAEREVDYRAAGHELLAVPGEDGRVDLPALLAELAARGANEVLVEAGPRLAGAFARQGLVDEYRLFVAPKFL
GSTARPLLELPLERMAEARELKIRDIRAVGEDWQIVAVPAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 4e-62 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 4e-62 49