Gene Information

Name : hemC (Avin_47600)
Accession : YP_002801840.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 4833751 - 4834695 bp
Length : 945 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGCCCATGCCCCGCGAGATCCGCATAGCCACCCGCAAGAGTGCCCTGGCCCTGTGGCAGGCCGAATATGTCAAGGCGCG
CCTGGAGCAGGCCCATCCGGGACTGGCGGTCAGCCTGGTGCCGATGGTCAGCCGCGGCGACAAGCTGCTCGACGCGCCGC
TGGCGAAGATCGGCGGCAAGGGTCTGTTCGTCAAGGAGCTGGAGACCGCCCTGCTGGAGAACGCGGCCGACATCGCCGTG
CACTCGATGAAGGACGTGCCGATGGAGTTTCCCGAAGGGCTCGGCCTGTATTGCATCTGCGAGCGCGAGGACCCGCGCGA
CGCCTTCGTCTCCAATGCCTTCGCCAGCCTCGACGAACTGCCGGCCGGCAGCCTGATCGGCACTTCCAGCCTGCGTCGCC
AGGCCCAGTTGCTGGCACGCCGGCCGGACCTGAAGATCCAGTTCCTGCGCGGCAACGTGAATACCCGCCTGGCCAAGCTG
GACGCCGGCGAGTACGACGCCATCATCCTCGCCGCCGCCGGTCTGATCCGCCTCGGTTTCGAGGGACGCATCCGTTCCCG
CATCGCCATCGCCGACAGCTTGCCGGCCGGCGGCCAGGGCGCGGTGGGCATCGAGTGCCGCAGCGCCGACCGGGAGATCC
AGGCCCTGCTCGCCCCGCTCGACCACGCGCCGACCGCCCTCCGGGTCGGTGCCGAGCGTGCCTTGAACAAGCGCCTCAAC
GGTGGCTGCCAGGTGCCCATCGCCTGCTATGCCGAGCTGGAGGACGGCCAGTTGTGGCTGCGTGGCCTGGTCGGCCAGCC
GGACGGCCGCCTGCTGCTGCGCGCTGAGGCCCGTGCTCCCGCCGATGAAGCCGAGGCGCTCGGCGTTCGGGTGGCCGAGG
CGTTGCTGGCCCAGGGCGCGCAGCGGATTCTGGCGGCGGTCTACGGCGAAGGCGAACGGCCGTGA

Protein sequence :
MPMPREIRIATRKSALALWQAEYVKARLEQAHPGLAVSLVPMVSRGDKLLDAPLAKIGGKGLFVKELETALLENAADIAV
HSMKDVPMEFPEGLGLYCICEREDPRDAFVSNAFASLDELPAGSLIGTSSLRRQAQLLARRPDLKIQFLRGNVNTRLAKL
DAGEYDAIILAAAGLIRLGFEGRIRSRIAIADSLPAGGQGAVGIECRSADREIQALLAPLDHAPTALRVGAERALNKRLN
GGCQVPIACYAELEDGQLWLRGLVGQPDGRLLLRAEARAPADEAEALGVRVAEALLAQGAQRILAAVYGEGERP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 8e-66 62
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 8e-66 62