Gene Information

Name : cadR (Avin_46190)
Accession : YP_002801702.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Resistance
Product : cadmium responsive transcriptional regulator, merR family
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 4695453 - 4695911 bp
Length : 459 bp
Strand : +
Note : -

DNA sequence : 
GTGAAAATCGGGGAGCTGGCGAAAATCACCGGAACGCCGGTGGAAACCATCCGCTACTACGAGCGCGAGGGCCTGCTGGC
CGCGCCGGCCCGCACGATGGGCAACTTCCGCATCTACACGGGCGCGCATGTCGAAAGGCTGTCGTTCATCCGCCGTTGCC
GCCTGCTGGACATGACCCACGAAGAGATCCGGGCGCTGCTCCGTTTCAAGGACGATCCCCGCCAGGACTGCGCCGATGTG
AACAGCCTCCTGGATGCGCACATCGCTCACGTGTCCGCGCGCATCCACGAACTCCGCCAGCTCGAGGAACAACTCAAACG
CCTGCGCGAGTGCTGCAGCGAGCCGAGCGAGGCCGCGCGCTGCGGCATCCTGCGCGAGCTGTCGCAGCCGCTGGCGGAGG
ACCGGACGCGGGGGAACAATCATGTGACCGGCTCGCATCCGGGCAAGCTCGCTCAATGA

Protein sequence : 
MKIGELAKITGTPVETIRYYEREGLLAAPARTMGNFRIYTGAHVERLSFIRRCRLLDMTHEEIRALLRFKDDPRQDCADV
NSLLDAHIAHVSARIHELRQLEEQLKRLRECCSEPSEAARCGILRELSQPLAEDRTRGNNHVTGSHPGKLAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-26 52
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 8e-29 51
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 6e-29 51
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 5e-29 51
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 4e-29 51
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 6e-29 51
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 5e-29 51
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 4e-29 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadR YP_002801702.1 cadmium responsive transcriptional regulator, merR family BAC0058 Protein 2e-30 61
cadR YP_002801702.1 cadmium responsive transcriptional regulator, merR family BAC0301 Protein 1e-29 52