|
Name : mutS (Avin_38640) Accession : YP_002800979.1 Strain : Azotobacter vinelandii DJ Genome accession: NC_012560 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 3907166 - 3909733 bp Length : 2568 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGAAAGCCTTTCTCAGCACACCCCGATGATGCAGCAATACTGGAAGCTCAAGCGCGAGCATCCGGATCAGTTGATGTT CTACCGCATGGGCGACTTCTACGAACTGTTCTACGAGGACGCCAAGAAAGCCGCCAAGCTGCTCGACATCACCCTCACCG CCCGCGGTCAGTCGGCCGGCAAGTCGATTCCCATGGCCGGCATTCCTTTCCACTCGGTCGAGGGGTATCTGGCCAAGCTG GTCAAGCTCGGCGAGTCGGTGGCGATCTGCGAGCAGATCGGCGACCCGGCCACCACCAAGGGACCGGTGGAGCGCCAGGT AGTGCGCATCATCACCCCGGGCACGGTCAGCGACGAGGCACTGCTCGACGAGCGCCGCGACAACCTGCTGGCGGCAGTGG TCGGTGACGAACGGCTGTTCGGTCTGGCGATACTGGACATCACCAGCGGTCGCTTCAACGTTCAGGAGATCCAGGGCTGG GAAAATCTGCTGGCCGAACTGGAACGCCTCAATCCGGCGGAGCTGCTGTATCCCGACGACTGGCCGGCCGGTCTGCCGCT GGAAAAGCGTCGTGGCGCACACCGCCGGGCGCCCTGGGACTTCGACTTCGACAGCGCGTACAAGAGCCTCTGCCAGCAGT TCGCCACCCAGGATCTGAAAGGCTTCGGCTGCGATGGGCTGGGTCTGGCCATCGGTGCCGCCGGCTGCCTGCTGGCCTAC GCCAGGGAAACCCAGCGCACAGCCCTGCCTCATCTGCGCGGTCTGCGTCACGAGCGCCTGGACGATACCGTGATCCTCGA CGGCGCCAGCCGGCGCAACCTGGAGCTGGACGTCAACCTTTCCGGCGGGCGCGATAATACCCTGCAGTCGGTGATCGACC GTTGCCAGACGGCCATGGGCAGCCGCCTGCTCGGTCGCTGGCTGAATCGCCCGCTGCGCGATCGCGCAGTGCTGGAGGCG CGCCAGGACACCGTCGCCTGCCTGCTGCAGGACTACCGCTTCGAGAGCCTGCAGCCGCAGCTCAAGGAGATCGGCGATGT CGAGCGCATCCTCGCCCGCATCGGCCTGCGCAATGCCCGCCCGCGCGATCTCGCCCGCCTGCGCGATGCTCTTGCCGCAC TGCCACAACTGCAGACGGCGCTGAGTCCGCTGGAAGCGCCGCACCTGCAGGCCCTGGCCGGCAACATCCGGACCTATCCG GAACTGGCCGAGCTGCTGAGACGCGCCATCATCGATAACCCGCCGGCGGTGATTCGCGATGGCGGAGTGCTCAAGCAGGG CTACGATGCGGAGCTGGACGAGCTTCTCTCGCTCAGCGAGAACGCCGGCCAGTTCCTCATGGACCTGGAGGCGCGGGAAA AGGCACGCACCGGGCTGCCCAACCTCAAGGTCGGCTACAACCGCATCCACGGCTATTACATCGAGCTGCCGCGGGTACAG GCCGAGCAGGCGCCGGCCGACTATATCCGCCGCCAGACCCTGAAGGGCGCCGAACGCTTCATCACGCCCGAGCTGAAGGC CTTCGAGGACAAGGCCCTGTCGGCCAAGAGCCGTGCCCTGGCGCGGGAAAAGGCACTCTACGAGGAACTGCTGGAGATCC TCATCGCCCAGTTGGCGCCGCTGCAGGAAACCGCGACCGCCCTGGCCGAACTGGATGTGCTGGCCAACCTCGCCGAGCGG GCCTTGAACCTCGACTTCAATCGCCCACGCTTCGTCGAAGAACCCTGCCTGCGCATTCGCCAGGGCCGCCATCCGGTGGT CGAGCAGGTGCTGGACACACCCTTCGTCGCCAACGATCTGGAACTCGACGACAACACCCGGATGCTGATCATCACCGGCC CCAACATGGGCGGCAAATCCACCTACATGAGGCAAACGGCGCTGATCGTGCTGCTCGCCCACATCGGCAGCTTCGTTCCG GCGCAGAGCTGCGAGCTTTCCCTGGTGGATCGCATTTTCACCCGCATCGGCTCCAGCGACGACCTGGCCGGCGGCCGTTC CACCTTCATGGTGGAGATGAGCGAGACGGCCAACATCCTGCACAATGCCAGCGAACGCAGCCTGGTGCTGATGGACGAGG TCGGCCGCGGCACCAGCACTTTCGACGGCCTGTCACTGGCCTGGGCGGCGGCCGAGCACCTGGCCGGCCTGCGCGCCTGG ACCCTGTTCGCCACCCATTATTTCGAGCTGACCGTGCTGGCGGAAAGCCAACCGGTAGTGGCCAACGTGCACCTGTCGGC CACCGAGCACAACGAGCGCATCGTCTTCCTCCACCATGTGCTGCCGGGACCGGCCAGCCAGAGTTACGGCCTGGCGGTCG CCCAACTGGCCGGCGTGCCTGGACCGGTGATCAGCCGTGCCCGCGAACACCTGGCGCGTCTGGAGGCCACCAGCCTGCCC CATGAAGCGCCGCTCCGCGAAGCAGGCAAACCCCAGCCGCCGATCCAGAGCGATCTGTTCGCCAGCCTGCCGCATCCCCT GATGGAGGAACTGGCACGCCTCAAGCCGGACGACCTGAGCCCGCGCCAGGCGCTTGAGCTATTGTATTCGTGGAAAACGA GGCTCTAA Protein sequence : MESLSQHTPMMQQYWKLKREHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSAGKSIPMAGIPFHSVEGYLAKL VKLGESVAICEQIGDPATTKGPVERQVVRIITPGTVSDEALLDERRDNLLAAVVGDERLFGLAILDITSGRFNVQEIQGW ENLLAELERLNPAELLYPDDWPAGLPLEKRRGAHRRAPWDFDFDSAYKSLCQQFATQDLKGFGCDGLGLAIGAAGCLLAY ARETQRTALPHLRGLRHERLDDTVILDGASRRNLELDVNLSGGRDNTLQSVIDRCQTAMGSRLLGRWLNRPLRDRAVLEA RQDTVACLLQDYRFESLQPQLKEIGDVERILARIGLRNARPRDLARLRDALAALPQLQTALSPLEAPHLQALAGNIRTYP ELAELLRRAIIDNPPAVIRDGGVLKQGYDAELDELLSLSENAGQFLMDLEAREKARTGLPNLKVGYNRIHGYYIELPRVQ AEQAPADYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKALYEELLEILIAQLAPLQETATALAELDVLANLAER ALNLDFNRPRFVEEPCLRIRQGRHPVVEQVLDTPFVANDLELDDNTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVP AQSCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNASERSLVLMDEVGRGTSTFDGLSLAWAAAEHLAGLRAW TLFATHYFELTVLAESQPVVANVHLSATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPGPVISRAREHLARLEATSLP HEAPLREAGKPQPPIQSDLFASLPHPLMEELARLKPDDLSPRQALELLYSWKTRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_002800979.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 60 |
