Gene Information

Name : mutS (Avin_38640)
Accession : YP_002800979.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 3907166 - 3909733 bp
Length : 2568 bp
Strand : +
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
ATGGAAAGCCTTTCTCAGCACACCCCGATGATGCAGCAATACTGGAAGCTCAAGCGCGAGCATCCGGATCAGTTGATGTT
CTACCGCATGGGCGACTTCTACGAACTGTTCTACGAGGACGCCAAGAAAGCCGCCAAGCTGCTCGACATCACCCTCACCG
CCCGCGGTCAGTCGGCCGGCAAGTCGATTCCCATGGCCGGCATTCCTTTCCACTCGGTCGAGGGGTATCTGGCCAAGCTG
GTCAAGCTCGGCGAGTCGGTGGCGATCTGCGAGCAGATCGGCGACCCGGCCACCACCAAGGGACCGGTGGAGCGCCAGGT
AGTGCGCATCATCACCCCGGGCACGGTCAGCGACGAGGCACTGCTCGACGAGCGCCGCGACAACCTGCTGGCGGCAGTGG
TCGGTGACGAACGGCTGTTCGGTCTGGCGATACTGGACATCACCAGCGGTCGCTTCAACGTTCAGGAGATCCAGGGCTGG
GAAAATCTGCTGGCCGAACTGGAACGCCTCAATCCGGCGGAGCTGCTGTATCCCGACGACTGGCCGGCCGGTCTGCCGCT
GGAAAAGCGTCGTGGCGCACACCGCCGGGCGCCCTGGGACTTCGACTTCGACAGCGCGTACAAGAGCCTCTGCCAGCAGT
TCGCCACCCAGGATCTGAAAGGCTTCGGCTGCGATGGGCTGGGTCTGGCCATCGGTGCCGCCGGCTGCCTGCTGGCCTAC
GCCAGGGAAACCCAGCGCACAGCCCTGCCTCATCTGCGCGGTCTGCGTCACGAGCGCCTGGACGATACCGTGATCCTCGA
CGGCGCCAGCCGGCGCAACCTGGAGCTGGACGTCAACCTTTCCGGCGGGCGCGATAATACCCTGCAGTCGGTGATCGACC
GTTGCCAGACGGCCATGGGCAGCCGCCTGCTCGGTCGCTGGCTGAATCGCCCGCTGCGCGATCGCGCAGTGCTGGAGGCG
CGCCAGGACACCGTCGCCTGCCTGCTGCAGGACTACCGCTTCGAGAGCCTGCAGCCGCAGCTCAAGGAGATCGGCGATGT
CGAGCGCATCCTCGCCCGCATCGGCCTGCGCAATGCCCGCCCGCGCGATCTCGCCCGCCTGCGCGATGCTCTTGCCGCAC
TGCCACAACTGCAGACGGCGCTGAGTCCGCTGGAAGCGCCGCACCTGCAGGCCCTGGCCGGCAACATCCGGACCTATCCG
GAACTGGCCGAGCTGCTGAGACGCGCCATCATCGATAACCCGCCGGCGGTGATTCGCGATGGCGGAGTGCTCAAGCAGGG
CTACGATGCGGAGCTGGACGAGCTTCTCTCGCTCAGCGAGAACGCCGGCCAGTTCCTCATGGACCTGGAGGCGCGGGAAA
AGGCACGCACCGGGCTGCCCAACCTCAAGGTCGGCTACAACCGCATCCACGGCTATTACATCGAGCTGCCGCGGGTACAG
GCCGAGCAGGCGCCGGCCGACTATATCCGCCGCCAGACCCTGAAGGGCGCCGAACGCTTCATCACGCCCGAGCTGAAGGC
CTTCGAGGACAAGGCCCTGTCGGCCAAGAGCCGTGCCCTGGCGCGGGAAAAGGCACTCTACGAGGAACTGCTGGAGATCC
TCATCGCCCAGTTGGCGCCGCTGCAGGAAACCGCGACCGCCCTGGCCGAACTGGATGTGCTGGCCAACCTCGCCGAGCGG
GCCTTGAACCTCGACTTCAATCGCCCACGCTTCGTCGAAGAACCCTGCCTGCGCATTCGCCAGGGCCGCCATCCGGTGGT
CGAGCAGGTGCTGGACACACCCTTCGTCGCCAACGATCTGGAACTCGACGACAACACCCGGATGCTGATCATCACCGGCC
CCAACATGGGCGGCAAATCCACCTACATGAGGCAAACGGCGCTGATCGTGCTGCTCGCCCACATCGGCAGCTTCGTTCCG
GCGCAGAGCTGCGAGCTTTCCCTGGTGGATCGCATTTTCACCCGCATCGGCTCCAGCGACGACCTGGCCGGCGGCCGTTC
CACCTTCATGGTGGAGATGAGCGAGACGGCCAACATCCTGCACAATGCCAGCGAACGCAGCCTGGTGCTGATGGACGAGG
TCGGCCGCGGCACCAGCACTTTCGACGGCCTGTCACTGGCCTGGGCGGCGGCCGAGCACCTGGCCGGCCTGCGCGCCTGG
ACCCTGTTCGCCACCCATTATTTCGAGCTGACCGTGCTGGCGGAAAGCCAACCGGTAGTGGCCAACGTGCACCTGTCGGC
CACCGAGCACAACGAGCGCATCGTCTTCCTCCACCATGTGCTGCCGGGACCGGCCAGCCAGAGTTACGGCCTGGCGGTCG
CCCAACTGGCCGGCGTGCCTGGACCGGTGATCAGCCGTGCCCGCGAACACCTGGCGCGTCTGGAGGCCACCAGCCTGCCC
CATGAAGCGCCGCTCCGCGAAGCAGGCAAACCCCAGCCGCCGATCCAGAGCGATCTGTTCGCCAGCCTGCCGCATCCCCT
GATGGAGGAACTGGCACGCCTCAAGCCGGACGACCTGAGCCCGCGCCAGGCGCTTGAGCTATTGTATTCGTGGAAAACGA
GGCTCTAA

Protein sequence :
MESLSQHTPMMQQYWKLKREHPDQLMFYRMGDFYELFYEDAKKAAKLLDITLTARGQSAGKSIPMAGIPFHSVEGYLAKL
VKLGESVAICEQIGDPATTKGPVERQVVRIITPGTVSDEALLDERRDNLLAAVVGDERLFGLAILDITSGRFNVQEIQGW
ENLLAELERLNPAELLYPDDWPAGLPLEKRRGAHRRAPWDFDFDSAYKSLCQQFATQDLKGFGCDGLGLAIGAAGCLLAY
ARETQRTALPHLRGLRHERLDDTVILDGASRRNLELDVNLSGGRDNTLQSVIDRCQTAMGSRLLGRWLNRPLRDRAVLEA
RQDTVACLLQDYRFESLQPQLKEIGDVERILARIGLRNARPRDLARLRDALAALPQLQTALSPLEAPHLQALAGNIRTYP
ELAELLRRAIIDNPPAVIRDGGVLKQGYDAELDELLSLSENAGQFLMDLEAREKARTGLPNLKVGYNRIHGYYIELPRVQ
AEQAPADYIRRQTLKGAERFITPELKAFEDKALSAKSRALAREKALYEELLEILIAQLAPLQETATALAELDVLANLAER
ALNLDFNRPRFVEEPCLRIRQGRHPVVEQVLDTPFVANDLELDDNTRMLIITGPNMGGKSTYMRQTALIVLLAHIGSFVP
AQSCELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNASERSLVLMDEVGRGTSTFDGLSLAWAAAEHLAGLRAW
TLFATHYFELTVLAESQPVVANVHLSATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPGPVISRAREHLARLEATSLP
HEAPLREAGKPQPPIQSDLFASLPHPLMEELARLKPDDLSPRQALELLYSWKTRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_002800979.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 60