Gene Information

Name : Avin_36590 (Avin_36590)
Accession : YP_002800781.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : phage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3720276 - 3721523 bp
Length : 1248 bp
Strand : +
Note : -

DNA sequence :
ATGACGCCCCAGGAACTCGCCCAGGCGTATATTGACGACCACGAGCTGCGACCCGCCAGCAAGACGATCTATCGGGCGGC
GACGAAAGCGCTCACCCGGCACTTCGGCACGACGATCGACGTGCAGACGATCGATCGGCGGAGCATCCTGTCCTGGCGCA
GCAAGGTTCTCGCGAAGGGCCTGGCGAAACGTAGCTGGAACACCTACTCCACCCACCTCAGGACTATCTGGGGATATGCC
ATCGAGTATGGCCTGCTCCCCCAGCAGCCCAACCCGTTCAAGAAAACCGCCGTTCGCCCACCCAAGCGGGCGAGCAAGAC
GGTCGCCAGCGATGCGATCCATCGCGCCAGGCGCTGGCTCGACAGCCTGGTGGACGAAGAGCGCTGTACCGGCAGGCGCA
GCAAAATCACCCCCGCCTGGTTCTGGCTGGCCACCTTCGAGATGTTCTACTACACGGGCATCCGCCTGAATGCCCTGCTC
TGCCTGCGCGTGCAGGACGTAGACTGGGACAGGCAACTGATCCTGATCCGCGGCGATACGGAAAAGACCCACCGGGAGTA
CCAGGTGCCGATCGTCGAGGGCCTGGCGCCGCATATCAGGGAGCTCCTGGACGAGGCGAAGCGTGCCGGCTTCGTGCCGA
CGGACCAGCTATTCAATGTCAACCGCTTCAGCCGGCACTACCGGCGCTCGGAGATGAATACCGACCAAGTCGAGGCGATG
TACCGCAAGCTGATCGAGAAGATCGGCGTGCGCATGACGCCCCACCGCTTCAGGCACACCCTGGCCTCCGACCTCATGCG
GCAGCCGGAGCGGAACATCCACCTGACCAAGAGCCTGCTGAACCACTCGAACATCGCCACCACGATGGGCTATATCGAGG
TGGACTATGACCACATGCGCGAGGTCCTGCACGAGCGTAGTCTGCAACGGAACGCCGCGCCGTTCGTGCGCTGCGAGGAT
GCCAGCGGCGCCCCGCCGCGAGACCGGGCGAGCGCGCCGCGTCTCCTCGAACAGCGCGAGCAGCGGATCGTCCTGCAGGT
GGAAGGTGTCGGCGGGGCACCGTGCGAGCTGACGCTGCGGCTTCTCGCCGCGCCGGCGGGAGAGATGGTCCCCTCGCCCC
CGGCGGAGCTCTTCGAGCCCAGCGTGATCTTCACCCTGATGAGCAATCGACCCGGTACCAGCACTCTCGGGAAAGCCGTC
CCTGGGCGCGGCCAAACGTCGCGGCTCACGGCGAAAGCCTCTCCATAG

Protein sequence :
MTPQELAQAYIDDHELRPASKTIYRAATKALTRHFGTTIDVQTIDRRSILSWRSKVLAKGLAKRSWNTYSTHLRTIWGYA
IEYGLLPQQPNPFKKTAVRPPKRASKTVASDAIHRARRWLDSLVDEERCTGRRSKITPAWFWLATFEMFYYTGIRLNALL
CLRVQDVDWDRQLILIRGDTEKTHREYQVPIVEGLAPHIRELLDEAKRAGFVPTDQLFNVNRFSRHYRRSEMNTDQVEAM
YRKLIEKIGVRMTPHRFRHTLASDLMRQPERNIHLTKSLLNHSNIATTMGYIEVDYDHMREVLHERSLQRNAAPFVRCED
ASGAPPRDRASAPRLLEQREQRIVLQVEGVGGAPCELTLRLLAAPAGEMVPSPPAELFEPSVIFTLMSNRPGTSTLGKAV
PGRGQTSRLTAKASP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int ABD94670.1 putative integrase Not tested ExoU island A Protein 3e-116 62
unnamed ABR13342.1 tyrosine recombinase xerC-like protein Not tested PAGI-5 Protein 4e-117 62
xerC AAP82947.1 integrase Not tested PAPI-2 Protein 9e-118 62
xerC AAP84129.1 integrase Not tested PAPI-1 Protein 8e-117 61
xerC CAI36141.1 putative integrase XerC Not tested PPHGI-1 Protein 8e-95 59