Gene Information

Name : Avin_36470 (Avin_36470)
Accession : YP_002800769.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 3711139 - 3711918 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence :
ATGAACCTGCAACACGCGCGCATCGCCGAACTGTGCCAGGCGCTCAAGCTCGAGCGCATCGTTGATCACTACCCACTGTT
GGCCCAGCAGGCGGTCAAGGACGACCTGAGCTTCGGCGACTTCCTGGAGCAACTGCTGCGGCACGAGCACGGCTTTCGCC
AGCAGCGCAGCCGCGAGTTGCTGACGCGGATGGCCTGCTTCCCGGCGATCAAGACGCTTGAGGAGTACGACTTCAGCTTC
AGCCCCGGTGTGCCCAAGGCCCTGCTGCATGAGCTGGCGGGCTTGGCCTTCGTCGAGCGCACCGAAAACATCGTGCTGAT
CGGCCCCTCGGGCGTCGGCAAGACGCACCTGGCCATCGCCCTCGGCTACCGGGCAGCACAGAGCGGCCTCAAGACCCGCT
TCATCACGGCGGCCGACCTGATGCTGCAACTGGGCGCGGCCCAGCGGCAGGGCCGGCTGAAGACCTACCTCAACCGCGCC
ATCCTGGCCCCCCGACTGCTAGTGATCGATGAGATCGGCTACCTGCCGTTCGGTCGCGAGGAGGCCAACCTGTTCTTCCA
GGTCGTCGCCAAACGCTACGAGAAGGGTTCGATGATCCTGACCTCGAACCTGCCGTTCAGCCAGTGGGCCGAGGCCTTCA
GCGGCGACGCCACGCTGACGGCGGCCATGCTGGATCGGCTGCTGCACCATGCCCATATCCTCACCCTGACCGGAGAAAGC
TACCGACTCAAGGACAAACGCAAGGCGGGCGTCATCCGCCAGAACCGTAACCCCGAGTGA

Protein sequence :
MNLQHARIAELCQALKLERIVDHYPLLAQQAVKDDLSFGDFLEQLLRHEHGFRQQRSRELLTRMACFPAIKTLEEYDFSF
SPGVPKALLHELAGLAFVERTENIVLIGPSGVGKTHLAIALGYRAAQSGLKTRFITAADLMLQLGAAQRQGRLKTYLNRA
ILAPRLLVIDEIGYLPFGREEANLFFQVVAKRYEKGSMILTSNLPFSQWAEAFSGDATLTAAMLDRLLHHAHILTLTGES
YRLKDKRKAGVIRQNRNPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 7e-66 68
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 6e-83 63
api84 CAF28558.1 putative transposase Not tested YAPI Protein 6e-83 63
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 6e-83 63
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 1e-82 63
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 6e-83 63
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 6e-83 63
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 9e-83 63
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 6e-83 63
unnamed CAA21402.1 - Not tested HPI Protein 9e-83 63
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 9e-83 63
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 9e-83 63
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-82 63
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 2e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avin_36470 YP_002800769.1 transposase/IS protein VFG1460 Protein 4e-66 68
Avin_36470 YP_002800769.1 transposase/IS protein VFG1515 Protein 4e-83 63
Avin_36470 YP_002800769.1 transposase/IS protein VFG1627 Protein 4e-83 63
Avin_36470 YP_002800769.1 transposase/IS protein VFG1606 Protein 4e-83 63
Avin_36470 YP_002800769.1 transposase/IS protein VFG1663 Protein 6e-83 63