Gene Information

Name : rdgC (Avin_35220)
Accession : YP_002800646.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 3595436 - 3596374 bp
Length : 939 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGGAGATCGCCAGCCCCATGTGGTTCCGCAACCTGCTCGTCTATCGCCTCACCCAGGATGTCCCCTTCAACGCCGAAAC
ACTGGAGGCGACGCTGGCAGCCAAACCGGCCCGCCCCTGCGCCAGCCAGGAACTGGCCACCTACGGCTTCGCCGCCCCGT
TCGGCAAGGGCGAGGATGCACCCCTGGTCCATGCCAGCCAGGAGTTCCTGCTGATCGCGGCACGCAAGGAAGAACGCATC
CTGCCTGGCAGCGTGGTGCGCGACGCCCTTCAGGAGAAGGTCGAGGAAATCGAGGCCGAACAAATGCGCAAGGTCTACAA
GAAGGAGCGCGAGCGCATCAAGGAGGACATCGTCCAGACTTTCCTGCCGCGGGCCTTCATACGCCGCTCCAGCACTTTCG
CGGCGATCATGCCCAGACAAGGGTTGATCCTGGTCGACACCGCCAGCGCCAAGAAGGCCGAGGATCTGCTCTCCACCCTG
CGCGAGGCCATCGGCTCGCTGCCGGTGCGCCCGCTGGGCGTGAAGGTCGCGCCCAGCGCCACCCTCACCGGCTGGGTCAA
GGCCCAGCAAGCCGCGGCGGACTTCCACCTGCTCGACGAATGCGAACTGCGCGATACCCACGAGGACGGCGGCGTGGTTC
GCTGCAAGCGCCAGGACCTGACCGGCGAAGAGATCCAGTTGCACCTGAGCACCGGCAAGCAGGTCACTCAACTGGCGCTC
GCCTGGCAGGACAAGCTGACCTTCGTGATCGACGACAAGCTGGCGATCAAGCGGCTGCGTTTCGAGGACCTGTTGCAGGA
ACAGGCCGCCCAGGATGGCGGCGATGACGCCCTGGCCCAGATGGATGCCAGCTTCACCCTGATGATGCTGACCTTCGCCG
AATACCTGCCGGCCCTGTTCGAGGCCCTGGGCGGGGAGGAAATCCCCCAGGGGCTCTGA

Protein sequence :
MEIASPMWFRNLLVYRLTQDVPFNAETLEATLAAKPARPCASQELATYGFAAPFGKGEDAPLVHASQEFLLIAARKEERI
LPGSVVRDALQEKVEEIEAEQMRKVYKKERERIKEDIVQTFLPRAFIRRSSTFAAIMPRQGLILVDTASAKKAEDLLSTL
REAIGSLPVRPLGVKVAPSATLTGWVKAQQAAADFHLLDECELRDTHEDGGVVRCKRQDLTGEEIQLHLSTGKQVTQLAL
AWQDKLTFVIDDKLAIKRLRFEDLLQEQAAQDGGDDALAQMDASFTLMMLTFAEYLPALFEALGGEEIPQGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 1e-48 41