Gene Information

Name : wbpP (Avin_29920)
Accession : YP_002800133.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 3095970 - 3097073 bp
Length : 1104 bp
Strand : +
Note : -

DNA sequence :
ATGACACGCTACCAACGCCTGCTCCACGACCTGCCGCAAACGCCCGCCACCTGGCTGATCACCGGGGTGGCCGGGTTCAT
CGGCTCAAACCTGCTGGAAACCCTGCTCGGACTCGACCAGTGGGTGGTGGGCCTGGACAACTTCTCCACTGGCCACCCGC
ACAATCTGGAAGAGGTCCGCCAAAGGACTTCCGCGCCGCGCTGGGCCAGGTTCCAGCTCATCCGCGGCGATATCCGCGAG
TTGCACGACTGCCGCCAGGCGATGACCTTCGCGGCGGTCGTGCCGGGCTGCCGGCCCCGGCCGGTCGAGCACGTCCTCCA
CCAGGCGGCCCTCGGCTCGGTGCCGCGCTCGCTGGAAGACCCCATCGCCACCAACGCCAGCAATGTCGACGGCTTCCTCA
ACATCCTGGTGGCCGCCCGCGATGCCGGGGTCAAGAGCTTCACCTACGCCGCCAGCAGCGCCGCCTACGGCGACCACCCC
GGTCTGCCGAAGATCGAGGACATCGTCGGTCGGCCGCTCTCCCCCTATGCGGTGAGCAAGTACGTCAACGAACTGTACGC
CGACGCTTTCGCCCGCAACTACGGGCTGCACAGCATCGGTCTGCGTTACTTCAACGTCTTCGGCAAGCACCAGGACCCGG
AGGGCGCCTATGCCGCGGTGATCCCGAAATGGATCGCGGCAATGCTGCGCGACGAGGAGGTGTTCATCGACGGCGATGGC
AGCACCAGCCGCGACTTCTGCCACGTCGACAACGCCGTGCAGGCCAACCTGCTCGCCGCCTGCGCCGAAGCCCGCGCGCG
CAATCAGGTCTACAACATCGCCGTCGGCGAACGCAGCACGCTCCAGCAGTTGTTCCAGGCGTTGCGCCAGAGCCTGGCGA
AAAACGGCGTGCGCTACGGCCGGGCGCCGCTCCATCGAGATTTCCGTCCGGGAGACGTACGCCATTCCCTGGCGGACATC
GGCAAGGCGCGGCGCCTGCTGGGCTACCTCCCGCAATACGACCTGCGGACCGGCATCGCCCAGGCGATGCCCTGGTACAT
CGCCCGGAACCCGACGTCGGTGTCTTCGTCGTCCGCGCCGGCGCAATTCGCTGCGCAACGGTGA

Protein sequence :
MTRYQRLLHDLPQTPATWLITGVAGFIGSNLLETLLGLDQWVVGLDNFSTGHPHNLEEVRQRTSAPRWARFQLIRGDIRE
LHDCRQAMTFAAVVPGCRPRPVEHVLHQAALGSVPRSLEDPIATNASNVDGFLNILVAARDAGVKSFTYAASSAAYGDHP
GLPKIEDIVGRPLSPYAVSKYVNELYADAFARNYGLHSIGLRYFNVFGKHQDPEGAYAAVIPKWIAAMLRDEEVFIDGDG
STSRDFCHVDNAVQANLLAACAEARARNQVYNIAVGERSTLQQLFQALRQSLAKNGVRYGRAPLHRDFRPGDVRHSLADI
GKARRLLGYLPQYDLRTGIAQAMPWYIARNPTSVSSSSAPAQFAAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-94 58
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-94 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpP YP_002800133.1 NAD-dependent epimerase protein VFG0430 Protein 1e-94 58