Gene Information

Name : wbpO (Avin_29910)
Accession : YP_002800132.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 3094696 - 3095973 bp
Length : 1278 bp
Strand : +
Note : -

DNA sequence : 
ATGCATACTCTGGAAGACCTGAAACTCGCCATCATCGGACTCGGTTACGTCGGCCTGCCGCTCGCGGTCGAATTCGGCAA
GCGCCGGCCGGTCGTCGGCTTCGACATCGACCATGCGCGCATCGCTGCCCTCGAGGCCGGGCACGACCGGACCCTGGAAG
TCGACGACCACGAACTGCGGGAAGCGCGCCAGCTCCGCTACAGCGCCGATATCGCCAGCCTGGCCGACTGCAACTTCTAC
ATCGTCACGGTGCCGACGCCGATCGACTCGCACAAGAAACCCGACTTGCTTCCCCTGATCCGCGCCTCGGAAACCATCGG
CCAGGTGCTGAAGCGCGGCGACATCGTCGTCTACGAGTCCACCGTCTATCCCGGCGCCACCGAGGAAGGCTGCGTTCCCG
TGCTCGAACGGGTTTCCGGCCTGGCGTTCAACCGCGACTTCTACGCCGGCTACAGCCCGGAACGGATCAACCCCGGCGAC
CGCGAGCACCGTATCACCGGCATCCGCAAGATCACCTCCGGCTCCACCCCCGAGGTGGCCGAACTGGTCGACGCGCTGTA
CCGGGAAATCATCGCCGCCGGCACCTACAAGGCGGACAGCATCCGCATCGCCGAGGCGGCCAAGGTGATCGAGAACACCC
AGCGCGACCTCAACATCGCCCTGGTCAACGAACTGGCGGTGATCTTCAACCGCATGGGCATCGACACCGAAGCGGTGCTG
CAGGCGGCCGGCACCAAATGGAACTTCCTGCCGTTCCGCCCCGGCCTGGTCGGCGGCCACTGCATCGGCGTCGATCCCTA
CTACCTGACCCACAAGGCCGAGGCCATCGGCTACCACCCGGAAATCATCCTCGCCGGCCGGCGCCTGAACGACGGCATGG
GCGGCTACGTGGTCTCTCAACTGATCAAGGCCATGCTCAGGCGGCGCATCCAGATCGACGGCGCCCGCGCCCTGGTCATG
GGCCTGACCTTCAAGGAAAACTGCCCGGACCTGCGCAACACGCGCGTCGTCGACATCATCCAGGAACTGCGCCAGTACAA
CATCTCGGTCGATGTCTACGACCCCTGGGTCGACGCCGAGGAAGCCCGGCGGGCCTACGACATCAGGCCGCTGGACTCAC
CGCCGGCCAGCGCCTACGACGGCATCATCCTCGCCGTCGCCCACCACCAGTTCCGCAGCATGGGCGCACCGGGCATCCGC
CGTTTCGGCAAGCCCGGCCACGTCCTCTACGACCTCAAGTACCTGCTCAAGCCCGACGAAGCGGATCTGCGCCTATGA

Protein sequence : 
MHTLEDLKLAIIGLGYVGLPLAVEFGKRRPVVGFDIDHARIAALEAGHDRTLEVDDHELREARQLRYSADIASLADCNFY
IVTVPTPIDSHKKPDLLPLIRASETIGQVLKRGDIVVYESTVYPGATEEGCVPVLERVSGLAFNRDFYAGYSPERINPGD
REHRITGIRKITSGSTPEVAELVDALYREIIAAGTYKADSIRIAEAAKVIENTQRDLNIALVNELAVIFNRMGIDTEAVL
QAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAEAIGYHPEIILAGRRLNDGMGGYVVSQLIKAMLRRRIQIDGARALVM
GLTFKENCPDLRNTRVVDIIQELRQYNISVDVYDPWVDAEEARRAYDIRPLDSPPASAYDGIILAVAHHQFRSMGAPGIR
RFGKPGHVLYDLKYLLKPDEADLRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-150 68
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-150 68
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-113 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
wbpO YP_002800132.1 polysaccharide biosynthesis protein VFG0431 Protein 5e-151 68