Gene Information

Name : Avin_29510 (Avin_29510)
Accession : YP_002800093.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3040905 - 3041657 bp
Length : 753 bp
Strand : -
Note : -

DNA sequence : 
ATGAATACCATCACTTCGATAGGCATGGCCCCGCTCGTCGAGCTGCGCCGGGCCACCAAGCACTACCAGATCGGCGAAAA
GCCGGTGATCGCCCTCAAGGGCATCGACATCAGCATCCAGGAGCGCGAGTTCGTCGCTATCTGGGGACCCTCGGGGTCCG
GCAAGTCGACCCTGTGCAACCTCATCGGCATGCTCGACTCGCCCACCTCGGGCAGCGTGCTGATCGACGGCCGGGAGGTC
GACGACCTGTCGGACAACGCCCGCAGCGAGCTGCGCAACCGGACCATCGGCTTCGTCTTCCAGAACTTCAACCTGATACC
GGTGCTCTCGGCGCTGGAGAACGTCATGCTGCCGCTGCAGATCGCCGGCGCTTCCTCCGTCGTCGCCCGGGAGCGGGCGC
TGGAGCGGCTGACCGAGGTGGGCCTCGAGAAGCACGTCGCCCACCGTCCGGCCAAGCTTTCCGGCGGCCAGCAGCAGCGG
GTCGCCATCGCCCGGGCGCTGGTCACCGACCCGGCCCTGGTGATCGCCGACGAACCCACCGCCAACCTCGACTCCGGCAA
CGCCCGACGGATCATCGAGCTGATGCTCGACATCAACGCCAGCCACGGCACCGCCTTCGTCTTCTCGACCCATGACCAGC
GCCTGCTGGAGAGCGTCAAGCGCCGGGTCCTGATGCAGGACGGCGAGATCGGCAGCGACAGCCAGCCGGCGCGTCCGGGA
GCGCAGACCCGCATCGCAGGGAGCCGCCCATGA

Protein sequence : 
MNTITSIGMAPLVELRRATKHYQIGEKPVIALKGIDISIQEREFVAIWGPSGSGKSTLCNLIGMLDSPTSGSVLIDGREV
DDLSDNARSELRNRTIGFVFQNFNLIPVLSALENVMLPLQIAGASSVVARERALERLTEVGLEKHVAHRPAKLSGGQQQR
VAIARALVTDPALVIADEPTANLDSGNARRIIELMLDINASHGTAFVFSTHDQRLLESVKRRVLMQDGEIGSDSQPARPG
AQTRIAGSRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avin_29510 YP_002800093.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7686878. Protein 3e-44 47
Avin_29510 YP_002800093.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 2e-35 45
Avin_29510 YP_002800093.1 antimicrobial peptide ABC transporter ATPase NC_008702.1.4606598. Protein 2e-38 45