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Name : rph (Avin_02850) Accession : YP_002797520.1 Strain : Azotobacter vinelandii DJ Genome accession: NC_012560 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 269516 - 270235 bp Length : 720 bp Strand : + Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGAAACGTCCCAGTGGCCGAGCGCCCCACCAGTTGCGTCCGATTCGCATCACCCGCAACTACACCCGGCATGCCGAGGG CTCGGTGCTGGTGGAGTTCGGCGACACCCGGGTGATCTGCACGGTCAGCGCCGAGGCCGGCGTGCCACGTTTCCTCAAGG GCCAGGGCAAGGGCTGGCTGACCGCCGAGTACGGCATGCTGCCGCGGGCCACCGGGGAGCGTATGGCGCGCGAGGCCAGC CGCGGCCGGCAGGGCGGGCGCACCCTGGAGATCCAGCGGCTGATCGGTCGTTCGCTGCGCGCCGCGCTGGACATGAGCAA GCTGGGCGAGAACACCCTGTACGTCGACTGCGACGTGATCCAGGCCGACGGCGGTACCCGCACGGCCTCGATCACCGGCG CCATGGTGGCGCTGGTCGATGCCCTGGCGGTGTTGAAGAAGCGCGGGGCGCTGAAGGGCGATCCCCTGAAGCAGATGGTC GCGGCGGTTTCCGTGGGCATCTACCAGGGCGAGCCGATCCTGGATCTGGACTATCCCGAGGACTCCGACGCCGAGACCGA CCTCAACGTGGTGATGACCGACGCCGGCGGTTTCATCGAGGTGCAGGGCACCGCCGAGGGCGAGCCTTTCCAGCCGGAGG AGCTGAACGCCATGCTGGCCCTGGCCACCCAGGGCATCCGCGAGCTGTTCGAGCTGCAACGCGCCGTGCTGGCCGACTGA Protein sequence : MKRPSGRAPHQLRPIRITRNYTRHAEGSVLVEFGDTRVICTVSAEAGVPRFLKGQGKGWLTAEYGMLPRATGERMAREAS RGRQGGRTLEIQRLIGRSLRAALDMSKLGENTLYVDCDVIQADGGTRTASITGAMVALVDALAVLKKRGALKGDPLKQMV AAVSVGIYQGEPILDLDYPEDSDAETDLNVVMTDAGGFIEVQGTAEGEPFQPEELNAMLALATQGIRELFELQRAVLAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 8e-62 | 62 |
