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Name : serS (Avin_28180) Accession : YP_002799965.1 Strain : Azotobacter vinelandii DJ Genome accession: NC_012560 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 2902799 - 2904079 bp Length : 1281 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGACTCCAAACTGGTTCGTACCCAACTGCAGGAGATTGTGGGCCGCCTGGCAACCCGTGGCTTCCAACTGGACGT GGCGCGTTTCGAGAGCCTCGAAGCCCAGCGCAAGGCCGTGCAAACCCGCACCGAACAGCTGCAGGCCGAGCGCAACGCCC GCTCCAAAACCATCGGCCAGGCCAAGTCGCGCGGCGAGGACATCGCGCCGCTGCTGGCCGAGGTCGACCGCATGGGCAGC GATCTGGAGGCCGGCAAGCGCGAGCTGGACGCCATCCAGGCCGAGCTGGACGCCTTGATGCTGAGCATTCCCAACCTGCC TCACGAGTCGGTGCCGGTCGGCGCCGACGAAGAGGACAACGTGGAGGTGCGCCGCTGGGGAGTCCCGCGTACCTTCGATT TCGCGATCAAGGATCACGTCGCCCTCGGCGAGCGCCATGGCTGGCTGGACTTCGAGACCGCCGCCAAGCTCTCCGGCGCC CGCTTCGCCCTGATGCGCGGCCCCATCGCCCGGCTGCACCGGGCGCTGGCGCAGTTCATGCTCGACCTGCACACCGGCGA ACACGGCTACGAGGAAGCCTACACCCCTTATCTGGTACAGGCGCCGGCCCTGCAGGGCACCGGTCAGTTGCCCAAGTTTG AGGAGGATCTGTTCAAGATCAGCCGCGAGGGCGAGGCCGATTTCTACCTGATCCCCACCGCCGAGGTATCGCTGACCAAC ATCGTGGCCGGCGAGATCCTCGACGCCAGGCAACTGCCGCTGAAGTTCGTCGCCCATACCCCGTGCTTTCGCAGCGAGGC CGGCGCCTCCGGCCGCGACACCCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTGGAAATGGTGCGGATCGTCGATC CGGCCAAGTCCTACGAGGCGCTGGAGGAACTGACCGCCAATGCCGAGAAGGTATTGCAGCGGCTCGAATTGCCGTACCGC GTGCTGGCCCTGTGCACCGGCGACATGGGCTTTAGCGCGACCAAGACCTACGATCTGGAAGTTTGGGTGCCGAGCCAGGA CAAGTACCGGGAAATCTCCTCCTGCTCCAACTGCGGCGATTTCCAGGCGCGGCGCATGCAGGCGCGCTGGCGCAACCCGG AAACCGGCAAGCCGGAGCTGGTGCATACTCTCAATGGTTCCGGCTTGGCGGTCGGCCGCACTCTGGTGGCGGTGCTGGAA AACTACCAGCAGGCCGACGGCTCGATCCGCGTGCCCGAGGTGCTCAAGCCCTACATGGGGGGTATCGAGGTCATCGGCTA G Protein sequence : MLDSKLVRTQLQEIVGRLATRGFQLDVARFESLEAQRKAVQTRTEQLQAERNARSKTIGQAKSRGEDIAPLLAEVDRMGS DLEAGKRELDAIQAELDALMLSIPNLPHESVPVGADEEDNVEVRRWGVPRTFDFAIKDHVALGERHGWLDFETAAKLSGA RFALMRGPIARLHRALAQFMLDLHTGEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKISREGEADFYLIPTAEVSLTN IVAGEILDARQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVRIVDPAKSYEALEELTANAEKVLQRLELPYR VLALCTGDMGFSATKTYDLEVWVPSQDKYREISSCSNCGDFQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLE NYQQADGSIRVPEVLKPYMGGIEVIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 4e-110 | 56 |
