Gene Information

Name : gacA (Avin_25030)
Accession : YP_002799662.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : Response regulator GacA
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2505520 - 2506149 bp
Length : 630 bp
Strand : +
Note : -

DNA sequence : 
GTGGTCGATGATCACGATCTGGTCCGCGCTGGCATCACCCGGATGCTGGCCGATATCGACGGCCTGCAGGTCGTCGGACA
AGGCAGCTCCGGCGAAGAGGCCCTGAAGAAGGCGCGCGATCTCAAGCCCGATGTGATCCTGATGGATGTCAAGATGCCCG
GCATCGGCGGCCTCGAGGCGACTCGCAAGCTGCAGCGCAGCAATCCCGACATCAAGGTGATCGCGGTGACGGTGTGCGAG
GAGGACCCGTTCCCCACGCGTCTCATGCAGGCCGGGGCGGCTGGCTACCTGACCAAGGGCGCGGCTCTCGACGAGATGGT
CCAGGCCATTCGCCAAGTCTTCGCCGGGCATCGCTATATCAGCCCGCAAATCGCCCAGCAACTGGCCCTGAAGGCCTTCC
AGCCGCAGCAGAGCGGTTCTCCCTTCGATCTGCTCTCCGAGCGGGAGATCCAGATCGCCCTGATGATCGCCAATTGCGAG
AAGGTGCAGAGCATTTCCGACAAGCTCTGTCTCTCGCCGAAGACCGTGAACACCTACCGCTACCGCATCTTCGAGAAACT
TTCCATCAACAGCGACGTGGAGCTGGCGCTATTGGCCGTGCGACACGGCATGGTCGACGCATCCAGCTGA

Protein sequence : 
MVDDHDLVRAGITRMLADIDGLQVVGQGSSGEEALKKARDLKPDVILMDVKMPGIGGLEATRKLQRSNPDIKVIAVTVCE
EDPFPTRLMQAGAAGYLTKGAALDEMVQAIRQVFAGHRYISPQIAQQLALKAFQPQQSGSPFDLLSEREIQIALMIANCE
KVQSISDKLCLSPKTVNTYRYRIFEKLSINSDVELALLAVRHGMVDASS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 2e-54 55
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 2e-54 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gacA YP_002799662.1 Response regulator GacA VFG1889 Protein 4e-54 54