Gene Information

Name : Avin_18630 (Avin_18630)
Accession : YP_002799050.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : Response regulator, two-component
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1844443 - 1845102 bp
Length : 660 bp
Strand : +
Note : -

DNA sequence : 
ATGCGTATTTTGCTGGTGGAGGACGATGCGGCGCTGGGCGAGGGTATCCGCACCGCCCTCAAGCCCGAGGGCTATACGGT
CGACTGGCTGCAGGACGGCGCCAGCGCGCTGCACGCCCTCGGTTGCGAGAGCTTCGATCTCTGTGTGCTCGATCTCGGCC
TGCCGCGGCTGGATGGTCTGGACGTGCTCCGCCGCCTGCGTGCCGCGGGCAATCCGCTGCCGGTGCTGGTGCTGACCGCG
CGCGACGCGACCAGCGAGCGCATCGCCGGACTGGATGCCGGCGCCGACGACTACCTGGTCAAGCCCTTCGATGTCGCCGA
GCTGAAAGCCCGTCTGCGGGCGCTGCTGCGGCGCAGCTTCAACCGCCCGCAGCCGGCCCTGGAATATCGCGGCATCCAAC
TCGACCCGCAGAGCCAGGCGGTCAGTTACCAGGGGCGGGACATCACCCTGGCGCGCAAGGAGTTTTTGCTGCTGCACGAA
CTGCTGGCGCAGCCGGGCCGGGTGCTGACCCGCGATCGTCTGCAGCAGGCGCTCTACGGCTGGAGCGAAGAGGTGGAGAG
CAACGCCCTGGAGGTGCATGTGCACCACCTGCGGCGCAAGTTCTTTCCCGAACTGATCCGTACCGTGCGCGGCGTCGGCT
ACATGGTGGACAAGGCCTGA

Protein sequence : 
MRILLVEDDAALGEGIRTALKPEGYTVDWLQDGASALHALGCESFDLCVLDLGLPRLDGLDVLRRLRAAGNPLPVLVLTA
RDATSERIAGLDAGADDYLVKPFDVAELKARLRALLRRSFNRPQPALEYRGIQLDPQSQAVSYQGRDITLARKEFLLLHE
LLAQPGRVLTRDRLQQALYGWSEEVESNALEVHVHHLRRKFFPELIRTVRGVGYMVDKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 8e-26 47
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-20 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avin_18630 YP_002799050.1 Response regulator, two-component BAC0347 Protein 1e-18 42
Avin_18630 YP_002799050.1 Response regulator, two-component BAC0111 Protein 9e-19 41
Avin_18630 YP_002799050.1 Response regulator, two-component BAC0308 Protein 2e-19 41
Avin_18630 YP_002799050.1 Response regulator, two-component NC_002516.2.879194.p Protein 9e-16 41
Avin_18630 YP_002799050.1 Response regulator, two-component BAC0288 Protein 4e-20 41
Avin_18630 YP_002799050.1 Response regulator, two-component BAC0197 Protein 2e-23 41
Avin_18630 YP_002799050.1 Response regulator, two-component BAC0638 Protein 4e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avin_18630 YP_002799050.1 Response regulator, two-component VFG1390 Protein 2e-27 49
Avin_18630 YP_002799050.1 Response regulator, two-component VFG0473 Protein 5e-27 47
Avin_18630 YP_002799050.1 Response regulator, two-component VFG0596 Protein 4e-21 41