Gene Information

Name : Avin_18520 (Avin_18520)
Accession : YP_002799039.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Resistance
Product : heavy metal translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 1830928 - 1833066 bp
Length : 2139 bp
Strand : +
Note : -

DNA sequence :
GTGCAGCCGCTGGCGCTTCCGGCCGAGGGCCCGGAGGTCGTGCGCTACCGTATCGACAACATGGACTGTCCCGTCGAGGA
GCGGCTGATCCGCGGCAGGCTGGAAGCCTTTCCGGGCATCGCCGGGCTGGACTTCGACCTGCTGGGGCGCACATTGACCG
TGCATCATCGTCTGGACTCCACCGCGTCGGTCGAAGCGCAACTGCGCGCCATCGGCATGCAGGCGCGGCGGCTCGATGCG
GCGGCCCCCTCCGGCTCGCAGGCGACCGCCGAGGCCCCGGGGCAGCGCTGGTGGCCGCTGGCGCTGGCCGGGGTCAGCGC
GACGCTGGCCGAGGTCGTGCACTGGCTCAACGGCGGCAACCACTGGCTGGTGGTGGTCCTTGCCGTGCTGGCGATCGTCA
GCGGCGGCCTTTCGACCTACAGGAAAGGCTGGATCGCGCTCAGGAACCGCGACCTGAACATCAATGCGCTGATGTCGATC
GCCGTCACCGGCGCGATGCTCATCGGCGAATGGCCGGAGGCAGCCATGGTGATGGTTCTGTTCGCCCTGGCCGAGGTGAT
CGAGGCCCGCTCGCTGGACCGCGCGCGCGATGCCATCCGCGGCCTGCTGGAGCTGGCGCCGGACACCGCCACCGTCCTGC
AGGCGGACGGCGAATGGCGCAGCGTACCCGCCCGGCAGGTGGCGGTCGGCGCGACGGTGCGCCTGCGGCCCGGCGAGCGG
ATCGCCCTGGACGGCGTGGTGACCGACGGGCGCTCGAGCGTCGACCAGGCGCCGATCACCGGCGAGAGCCTGCCGGTGGA
AAAGGCCGAGGGCGATAGCGTGTTCGCCGGCACCATCAACCAGACGGGCTCGTTCGAGTACCGGGTGACGGCCGAGGCCG
GACAGTCGACGCTGTCGCGGATCATCCATGCCGTCGAGTCCGCCCAGGCCGCCAGGGCGCCGACCCAGCGCTTCATCGAC
CGCTTCGCGCAGGTCTACACGCCGGCGATTTTCCTCGTCGCCTTGCTGACCGCGGTGCTGCCGCCGCTGTTCGCGGACGG
CGCCTGGACGGACTGGATCTACAAGGCGCTGGTGTTGCTGGTGATCGCCTGTCCGTGCGCGCTGGTGATCTCCACCCCGG
TGACCATCGTCAGCGGCCTGGCGGCGGCGGCCCGCAAGGGCATCCTCATCAAGGGCGGCGTGTACCTGGAGGAGGGGCGC
AGGCTGGCCACCCTGGCCCTCGACAAGACCGGCACCCTCACCCGCGGCAAGCCGGCGCAGACCGATTTCGTCGTCTGGAC
GGGCGACGAAGCGCCGGTGCGCGCCCTGGCGGCGAGCCTCGCCGCGCGTTCCGATCACCCGGTGTCCCGGGCCATCGCCG
TGGCGGCGGAGGAAGCTGGGCTGGCGATCCGCCCGGTGGACGAGTTGCAGGCCATTCCGGGGCGCGGCGTGCGCGGGCGT
ATCGACGGGCACCTGTACCAGTTGGGCAACCACCGGCTGGTCGAGGAACTGGGGCTGTGCTCGGAGGCCATCGAGGCTCG
CCTGTTCGCCCTGGAGCGCCAGGGCAAGTCGGTGGTGGTGCTGGTCGACGAACAGGACGTCCTGGGGATCTTCGCGGTGG
CCGACACGCTGCGGGACAGCAGCCGGGAGGCCATCGGCGAACTGCACGCACTCGGCGTGAAGACCCTGATGCTGAGCGGC
GACAACGTCCATACCGCGGAAACCATCGCCCGTTCGGTCGGCATCGACGAGGCGCGCGGCGGTCTGCTGCCGGAGGACAA
GCTCAGGATCGTCGAAGGCTTGAGGGAGGCGGCCGGGAAGGGCACGGTCGGCATGGTCGGCGACGGCATCAACGACGCGC
CCGCCCTGGCCAAGGCCGATATCGGCTTCGCCATGGGCGCGGCCGGTACCGATACCGCGCTGGAAACCGCGGACGTGGCC
CTGATGGACGACGACCTGCGCAAGATTCCGGCCTTCGTGCGCCTCTCGCGGGCGACCGCGACGGTACTGTGGCAGAACAT
CGCCTTCGCCCTCGGGATCAAGGCGGTGTTCATGCTGCTGACCTTCGCCGGTCTGGGCAGCCTGTGGATGGCGGTGTTCG
CCGACATGGGCGCCAGCCTGCTGGTGGTGGCCAACGGACTGCGCCTGTCGCGCGGGTAG

Protein sequence :
MQPLALPAEGPEVVRYRIDNMDCPVEERLIRGRLEAFPGIAGLDFDLLGRTLTVHHRLDSTASVEAQLRAIGMQARRLDA
AAPSGSQATAEAPGQRWWPLALAGVSATLAEVVHWLNGGNHWLVVVLAVLAIVSGGLSTYRKGWIALRNRDLNINALMSI
AVTGAMLIGEWPEAAMVMVLFALAEVIEARSLDRARDAIRGLLELAPDTATVLQADGEWRSVPARQVAVGATVRLRPGER
IALDGVVTDGRSSVDQAPITGESLPVEKAEGDSVFAGTINQTGSFEYRVTAEAGQSTLSRIIHAVESAQAARAPTQRFID
RFAQVYTPAIFLVALLTAVLPPLFADGAWTDWIYKALVLLVIACPCALVISTPVTIVSGLAAAARKGILIKGGVYLEEGR
RLATLALDKTGTLTRGKPAQTDFVVWTGDEAPVRALAASLAARSDHPVSRAIAVAAEEAGLAIRPVDELQAIPGRGVRGR
IDGHLYQLGNHRLVEELGLCSEAIEARLFALERQGKSVVVLVDEQDVLGIFAVADTLRDSSREAIGELHALGVKTLMLSG
DNVHTAETIARSVGIDEARGGLLPEDKLRIVEGLREAAGKGTVGMVGDGINDAPALAKADIGFAMGAAGTDTALETADVA
LMDDDLRKIPAFVRLSRATATVLWQNIAFALGIKAVFMLLTFAGLGSLWMAVFADMGASLLVVANGLRLSRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 69
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 8e-119 48
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 2e-121 42
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 2e-121 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avin_18520 YP_002799039.1 heavy metal translocating P-type ATPase BAC0298 Protein 0.0 70
Avin_18520 YP_002799039.1 heavy metal translocating P-type ATPase BAC0100 Protein 2e-63 41
Avin_18520 YP_002799039.1 heavy metal translocating P-type ATPase BAC0124 Protein 7e-70 41