Gene Information

Name : Avin_18440 (Avin_18440)
Accession : YP_002799031.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase family protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1825049 - 1826548 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGCGTCCAACGATACCCGTTCGAACTACGCTCCCGACAGCAGCTACGGCCTGTTCATCGACAATCAGTGGGTTGC
AGGTGAAAACGGCGAAACCATCACCATCCTCAATCCCGCCAACGGGAAAACCCTCACCGGCATCCCGAACGCCACGGCGG
TCGACGTCGACCGTGCAGTACAGGCCGCGCAACGCGCTTTCGAAGCCTGGCGCAGCACCACGCCAATAGAACGCGCCAAT
GCGCTGCTGAAGATCGCCGACTTGCTGGAAGCCGACGCCGAACGGTTCGCCGCCCTGGAATCCCTCGATGTAGGCAAGCC
AATCCGTGAGAGCAGTTCCGTCGACATCCCGTTGGCGATCGATCACTTCCGCTATTTCGCCGGCGTGATCCGCAGCCACT
CGGACGAGGCAGTCATGCTGGATGAACAGACGCTCAGCATCGTGCTCAGCGAGCCGCTGGGCGTCGTCGGCCAGGTGATC
CCTTGGAACTTCCCACTGCTGATGGCCGCCTGGAAAATCGCCCCGGCCATCGCGATAGGAAATACCGTCGTCATCAAACC
TTCCGAACTGACCCCGGTCAGCATCCTCGAACTCGCAAAGATCTTCGCCCAGGTATTGCCGGCCGGGGTTGTGAACATCG
TCACCGGTACGGGTGCCTCGGCGGGCCAGGCGCTGCTGGACCATCCGGACGTGCGCAAGCTTGCCTTCACCGGCTCGACA
AGTGTCGGCCATCGGGTGGCCGACGCGGCGGCGAAGAAGCTCATTCCGGCGACCCTCGAGCTGGGCGGCAAGTCGGCCAA
TATCGTCTTCCCCGATGCCAACTGGGACAAGGCCGTGGAAGGCGCAGCACTCGCCATTCTGTGGAACCAGGGCCAAGTCT
GCGAATCCGGCGCTCGGCTGTTCGTGCACGAGTCGATCTACGAGCGCTTCCTGGATGAGGTCAAGCAGAAATTCGAAGCC
GTGCGCGTGGGCGACCCGCTGCATCCGGACACCATGATGGGTGCCCAGGTCAGCAAGACACAGATGGAGCGAATCCTTGG
CTACGTCGATATCGCCAAGCAGGAAGGTGCCAAGGTACTGCTAGGCGGTGGTCGTCTGACAGGTGCCGATTACGATGCGG
GCTTCTTCATCCAGCCAACAATCCTGGTCGACGTACGCAACGACATGCGTGTGGCCTACGAGGAAATCTTCGGTCCCGTT
CTATGCGTGATTCCGTTCAAGGACGAAGCGGACGTCATTGCCATGGCCAACGATTCGGAATACGGCCTGGCGGGCGCGGT
CTGGACCCAGGACATCAACCGGGCGCTGCGCGTGGCACGCGCGGTGGAAACCGGGCGGATGTGGGTCAACACCTATCACG
AAATCCCCGCCCACGCGCCCTTCGGCGGCTACAAGAAATCCGGCCTGGGACGGGAAACCCACAAGTCGATTCTGGAAGCC
TACAGCCAGAAGAAGAACATCTATGTCAGCCTCAACGAAGCGCCGCTCGGGTTGTTCTGA

Protein sequence :
MQASNDTRSNYAPDSSYGLFIDNQWVAGENGETITILNPANGKTLTGIPNATAVDVDRAVQAAQRAFEAWRSTTPIERAN
ALLKIADLLEADAERFAALESLDVGKPIRESSSVDIPLAIDHFRYFAGVIRSHSDEAVMLDEQTLSIVLSEPLGVVGQVI
PWNFPLLMAAWKIAPAIAIGNTVVIKPSELTPVSILELAKIFAQVLPAGVVNIVTGTGASAGQALLDHPDVRKLAFTGST
SVGHRVADAAAKKLIPATLELGGKSANIVFPDANWDKAVEGAALAILWNQGQVCESGARLFVHESIYERFLDEVKQKFEA
VRVGDPLHPDTMMGAQVSKTQMERILGYVDIAKQEGAKVLLGGGRLTGADYDAGFFIQPTILVDVRNDMRVAYEEIFGPV
LCVIPFKDEADVIAMANDSEYGLAGAVWTQDINRALRVARAVETGRMWVNTYHEIPAHAPFGGYKKSGLGRETHKSILEA
YSQKKNIYVSLNEAPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-111 51
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 4e-115 51
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 4e-115 51
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 4e-115 51
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-115 51
unnamed AAK01506.1 putative aldehyde dehydrogenase Not tested PAGI-1 Protein 7e-80 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avin_18440 YP_002799031.1 aldehyde dehydrogenase family protein VFG0082 Protein 5e-112 51