Gene Information

Name : Avin_14310 (Avin_14310)
Accession : YP_002798622.1
Strain : Azotobacter vinelandii DJ
Genome accession: NC_012560
Putative virulence/resistance : Virulence
Product : Response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1407503 - 1408183 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCCAGGGCCGCATTCTGGTGGTGGAGGACGAACCCAAGCTGGCGGCGCTGATCGGCGACTACCTGCGCGCCGCCGA
TTTCCAGGCCGAAACCCTCGCCGACGGACTGCGCGTCATCCCGCTGCTGCGCCGCCAGCCCCACGACCTGGTGATCCTCG
ACCTGATGCTGCCCGGCCGCGACGGCCTGGACATCTGCCGCGAACTGCGCGGCTTCAGCCGGGTGCCGGTGATCATGGTC
ACCGCGCGGGTCGAGGAGATCGACCGCCTGCTCGGCCTGGAAACGGGCGCCGACGACTACCTGTGCAAACCCTTCAGCCC
GCGCGAACTGGTGGCGCGGGTCAAGGCCGTGCTGCGCCGCAGCGGCAAGCCGCCGCCGCTGCCGGGGCTGCTCACCGACC
CGGCCAGCTACCGGGCCTACTGCAACGGCATCCCGCTGGACCTGACCCCGGTGGAATTCCGCCTGCTCGACGCCCTGCTG
GCCCGGCCCGGACAGGCGCTGACGCGCGAGCAACTGATGAACCACCTGTACGAGGACCACCGCATCGTCACCGACCGCAC
CGTCGACAGCCACGTCAAGAACCTGCGCCGCAAGCTGCAACAGGCGGCGCCGGGAGAAGACCCGATCCGCTCCATCTATG
GTGTGGGGTATTGCCTGGAATGGCGGGGAACCGGGGGTTGA

Protein sequence : 
MSQGRILVVEDEPKLAALIGDYLRAADFQAETLADGLRVIPLLRRQPHDLVILDLMLPGRDGLDICRELRGFSRVPVIMV
TARVEEIDRLLGLETGADDYLCKPFSPRELVARVKAVLRRSGKPPPLPGLLTDPASYRAYCNGIPLDLTPVEFRLLDALL
ARPGQALTREQLMNHLYEDHRIVTDRTVDSHVKNLRRKLQQAAPGEDPIRSIYGVGYCLEWRGTGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avin_14310 YP_002798622.1 Response regulator CP004022.1.gene1676. Protein 1e-60 57
Avin_14310 YP_002798622.1 Response regulator BAC0039 Protein 3e-59 56
Avin_14310 YP_002798622.1 Response regulator NC_002695.1.916589.p Protein 8e-59 56
Avin_14310 YP_002798622.1 Response regulator CP000034.1.gene2186. Protein 3e-59 56
Avin_14310 YP_002798622.1 Response regulator BAC0596 Protein 1e-59 55
Avin_14310 YP_002798622.1 Response regulator CP001138.1.gene2239. Protein 1e-59 55
Avin_14310 YP_002798622.1 Response regulator CP000647.1.gene2531. Protein 2e-58 55
Avin_14310 YP_002798622.1 Response regulator CP001918.1.gene3444. Protein 6e-59 55
Avin_14310 YP_002798622.1 Response regulator NC_010410.6002989.p0 Protein 2e-45 50
Avin_14310 YP_002798622.1 Response regulator NC_010400.5986590.p0 Protein 4e-45 50
Avin_14310 YP_002798622.1 Response regulator NC_011595.7057856.p0 Protein 2e-45 50
Avin_14310 YP_002798622.1 Response regulator CP001918.1.gene5135. Protein 7e-25 43
Avin_14310 YP_002798622.1 Response regulator AE000516.2.gene3505. Protein 2e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Avin_14310 YP_002798622.1 Response regulator VFG1702 Protein 6e-31 41