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Name : clpB (Avin_11960) Accession : YP_002798399.1 Strain : Azotobacter vinelandii DJ Genome accession: NC_012560 Putative virulence/resistance : Virulence Product : ATP-dependent protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1147811 - 1150375 bp Length : 2565 bp Strand : + Note : - DNA sequence : ATGCGAATCGACCGATTGACCAGCAAACTGCAACTTGCCTTGTCCGATGCCCAGTCCGTGGCAGTCGGCCTCGACCACGC CGCCATCGAGCCGCTACACCTGATGCAGGCGCTGCTCGATCAACAGGGGGGCTCGATCAGGCCGCTCCTGATGCAGGTCG GCTTCGATATCAACGGCCTGCGCCAGGCTCTGAGCAAGGAGCTGGATCAACTGCCCAAGCTGCAGAACCCCACTGGCGAC GTGAATCTGTCCCAGGACCTGGCGCGTCTGCTCAACCAGGCGGACCGCTTGGCCCAGCAGAAGGGGGATCAGTTCATTTC CAGCGAACTGGTGCTGCTCGCCGCGCTGGACGGCAACACCCGCCTGGGCAAGCTGCTGCTTGGCCAGGGCGTGTCGAAGA AGGCTATCGAGAACGCCATCGGTAACCTGCGTGGCGGCCAGACGGTGAACGATCCGAATGCCGAGGAGTCCCGCCAGGCC CTGGACAAGTACTGCGTCGACATGACCGCCCGGGCCGAGGAGGGCAAGCTCGACCCGGTGATCGGACGCGACGACGAGAT CCGCCGCACCATCCAGGTGCTGCAGCGGCGTACCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGTGTCGGCAAGACCG CCATCGTCGAAGGCCTCGCCCAGCGCATCGTCAACGGCGAGGTGCCGGACGGACTCAGGGACAAGCGCCTGCTGGCGCTG GACATGGGTTCGCTGATCGCCGGCGCCAAGTTCCGCGGCGAGTTCGAGGAGCGCCTGAAGGCCGTGCTCAACGAGCTGGC CAAGCAGGAGGGGCGCGTCATCCTGTTCATCGACGAACTGCACACCATGGTCGGCGCCGGCAAGGCCGAAGGCGCCATGG ATGCCGGCAACATGCTCAAGCCCGCTCTGGCGCGTGGCGAGCTGCATTGCGTCGGCGCCACCACCCTCGACGAGTACCGC CAGTACATCGAGAAAGATGCCGCGCTGGAGCGCCGCTTCCAGAAGGTGCTGGTGGACGAGCCGAGCGAGGAGGACACCAT CGCCATCCTGCGCGGCCTGAAGGAGCGCTACGAGGTGCACCATGGAGTGACCATCACCGACGGCGCCATCATCGCTGCGG CCAAGCTGTCGCACCGCTACATCACCGACCGCCAACTGCCGGACAAGGCCATCGACCTGATCGACGAGGCGGCCAGCCGC ATTCGCATGGAGATCGACTCCAAGCCCGAGGAACTGGATCGCCTGGATCGCCGGCTGATCCAGCTGAAGATCGAGCGTGA GGCGCTGAAGAAGGAAACCGACGAGGCGACCAAAAAGCGCCTGGCCAAGTTGGAAGAGGACATCGCCAAGCTCGAGCGCG AGTACGCCGACCTCGAGGAGATCTGGAAGTCGGAGAAGGCCGAGGTGCAGGGCTCGGCACAGATCCAGCAGCAATTGGAG CAGGCCAAGCTGGATCTGGAGGCGGCACGCCGCAAGGGTGATCTGAACCGGATGGCCGAGCTGCAGTACGGTTTGATTCC GGAGCTGGAGCGCAAGCTGGCCTCCGCCGACGGCGGGCAGCCGCGGGAGAACCAGTTGTTGCGCAATCGTGTCACCGACG AGGAGATCGCCGAGGTGGTCTCCAAGTGGACCGGCATCCCGGTGGCCAAGATGCTCGAGGGCGAGCGCGAGAAGCTGCTG AAGATGGAGGAGTTGCTGCATCAGCGGGTGATCGGCCAGAACGAGGCGGTGACCGCCGTGGCCAATGCGGTGCGGCGTTC CCGCGCCGGGCTCGCCGATCCGAACCGGCCGAGCGGCTCCTTCCTGTTCCTCGGCCCGACCGGGGTCGGCAAGACCGAGC TGTGCAAGGCGCTGGCCGAGTTCCTCTTCGATACCGAGGAGGCCCTGGTGCGCATCGACATGTCCGAGTTCATGGAGAAG CACTCGGTAGCCCGCTTGATCGGCGCCCCTCCGGGGTATGTCGGCTATGAGGAGGGCGGCTACCTGACCGAGGCGGTGCG CCGCAAGCCTTACTCCGTGGTGCTGATGGACGAGGTGGAAAAGGCTCACCCCGATGTGTTCAACATCCTTCTGCAGGTGC TGGAGGACGGTCGTCTGACCGATAGCCACGGGCGTACCGTGGACTTCAAGAACACCGTGGTGGTGATGACTTCCAACCTT GGTTCGGCGCAGATCCAGGAGCTGGCCGGCGATCGCGAGGCGCAGCGGGCGGCGGTGATGGATGCGGTAAGCCACCATTT CCGGCCGGAGTTCATCAACCGCATCGACGAGGTGGTGGTATTCGACCCGCTGGCCCGCGAGCAGATCGCCGGCATCGCCG AGATTCAGTTGAAGCGCCTGCGCCAGCGTCTGGCCGAGCGCGAGCTGAGCCTCGAACTTTCCGATGAGGCCCTGGACAAG CTGATCGCCGTCGGTTACGACCCGGTCTACGGGGCACGGCCCCTGAAGCGGGCGATCCAGCGCTGGATCGAGAACCCGCT GGCGCAGCAGATTCTCGCCGGGCAGTTCGCGCCTGGCGCGAAGATCTTCGCCAGGGTGGAGGGCGACGAGATCGTCTTTG GCTGA Protein sequence : MRIDRLTSKLQLALSDAQSVAVGLDHAAIEPLHLMQALLDQQGGSIRPLLMQVGFDINGLRQALSKELDQLPKLQNPTGD VNLSQDLARLLNQADRLAQQKGDQFISSELVLLAALDGNTRLGKLLLGQGVSKKAIENAIGNLRGGQTVNDPNAEESRQA LDKYCVDMTARAEEGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLRDKRLLAL DMGSLIAGAKFRGEFEERLKAVLNELAKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR QYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASR IRMEIDSKPEELDRLDRRLIQLKIEREALKKETDEATKKRLAKLEEDIAKLEREYADLEEIWKSEKAEVQGSAQIQQQLE QAKLDLEAARRKGDLNRMAELQYGLIPELERKLASADGGQPRENQLLRNRVTDEEIAEVVSKWTGIPVAKMLEGEREKLL KMEELLHQRVIGQNEAVTAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEK HSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVVVMTSNL GSAQIQELAGDREAQRAAVMDAVSHHFRPEFINRIDEVVVFDPLAREQIAGIAEIQLKRLRQRLAERELSLELSDEALDK LIAVGYDPVYGARPLKRAIQRWIENPLAQQILAGQFAPGAKIFARVEGDEIVFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-148 | 45 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-104 | 44 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-103 | 42 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-103 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002798399.1 | ATP-dependent protease | VFG2076 | Protein | 3e-104 | 44 |
