Gene Information

Name : LHK_00817 (LHK_00817)
Accession : YP_002794819.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 783222 - 783485 bp
Length : 264 bp
Strand : -
Note : Transposase IS3/IS911

DNA sequence :
ATGAAGAAACGATTCACCGAAGAACAGATCACCGGCTTCCTGCGTGAAGCAGAAGCCGGCATGCCCATTGCAGAGCTGTG
CCGCAGGCACACCTTCCCGGAAGGCAGCCATTACCCATGGCGCAACAAATTCGGCAGCATGAATGTCTCCGAGGCCAAGC
GCCTCAAGGAACTGGAGACCGAAAATGTGCGCCTGAAGAAACCCCTGGCCAAAACCATGCTCGAGAACGAGATTGCCAAA
GAGGCCCTGAGAAAAAAGTGGTGA

Protein sequence :
MKKRFTEEQITGFLREAEAGMPIAELCRRHTFPEGSHYPWRNKFGSMNVSEAKRLKELETENVRLKKPLAKTMLENEIAK
EALRKKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-22 62
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-22 62
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 2e-22 61
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-22 61
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 1e-13 43
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-13 43
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 4e-14 42