Gene Information

Name : smpB (LHK_00778)
Accession : YP_002794780.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : SmpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0691
EC number : -
Position : 745826 - 746278 bp
Length : 453 bp
Strand : -
Note : SsrA-binding protein

DNA sequence :
ATGAGCATCATCGAGAACAAAAAAGCCTTTCACGACTACTTCATCGAAGAACGTTTCGAGGCCGGGCTCGTGCTCGAAGG
CTGGGAAGTCAAATCCATCCGTGCAGGCCGCGTGCAGCTCAAGGAAGGCTACGTCGTGCTGATCGATGGCGCATTCTGGC
TGATCGGCTGCCACATCTCGCCGCTGCCCACCGCCAGTACCCACATCCATCCGGATCCGACCCGCCGGCGCAAGCTGCTG
CTGGCGCGCAAGCAGATCGACCGGCTGATCGGCAAGGTCGAACGCGCCGGCTACACGCTGATGCCGCTCAACCTGCATTA
CAAGGCCGGCTGGATCAAGCTGGAAATCGGCCTCGCCAAAGGCAAGAAGCAGCACGACAAGCGCGAAAGCGAAAAAGAAC
GCGAATGGCAGCGTGAAAAACAACGCATCATCAAGGATGTCGCCCGTGGCTGA

Protein sequence :
MSIIENKKAFHDYFIEERFEAGLVLEGWEVKSIRAGRVQLKEGYVVLIDGAFWLIGCHISPLPTASTHIHPDPTRRRKLL
LARKQIDRLIGKVERAGYTLMPLNLHYKAGWIKLEIGLAKGKKQHDKRESEKEREWQREKQRIIKDVARG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
smpB NP_230495.1 SsrA-binding protein Not tested VPI-1 Protein 1e-27 52
unnamed AET14351.1 SsrA-binding protein Not tested SaPI68111 Protein 4e-19 43