Gene Information

Name : ribD (LHK_00732)
Accession : YP_002794734.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 708691 - 709842 bp
Length : 1152 bp
Strand : +
Note : Riboflavin-specific deaminase/reductase

DNA sequence : 
ATGTTCAGCGCCGACGACCACCGCTACATGGCGCGCGCCCTGCAACTGGCGCGTCTGGGCATGACCAGTACCGCGCCCAA
TCCCCGCGTGGGCTGCGTTGTGGTCAGTGACGGGCAGGTGGCGGGAGAGGGCTGGCACGTCCGCGCCGGCACGCCGCATG
CCGAGCGGCATGCGCTGGCCATGGCCGGCGAGCGGGCGCGCGGCGCCACGGCCTACGTGACGCTGGAGCCGTGCAGCCAT
TTCGGCCGCACGCCGCCCTGCGCCGATGCACTGCTGCAAGCCGGAGTCGGGCGCGTGGTGGCGGCCATGGTCGATCCCAA
TCCGCTGGTCGCCGGTCAGGGCATGACACGTCTCGCCGCAGCCGGCATCGAGTGTGCCAGCGGTCTGCTGGAAGCCGAGG
CGTGCGAACTCAACCGCGGTTTTGTCAGCCGCATGACGCGCGGGCGGCCGTGGCTGACGGTGAAGCTGGGCATCAGCCTC
GACGGCAAGACCGCGCTGGCGGACGGCCAGAGCCAGTGGATTACCGGCGCGCAGGCGCGGGCGGACGTGATGCGCCAGCG
CGCCTGCCACGATGTCATCCTGACCGGCAGCGGCACCGTGCGGGCCGACAATCCGCAACTGACCGTGCGCAATCTGGTAC
CGGATGTCCTGCCGCCGGCATTGCAGGACACCCCGGCCGGCCGCCTGCAAGCTGCCGCCCCGGTGCGCCAGCCGCTGCGG
GTGATTGTCGACGGGGCCGGAACGCTCGATCCGGATGCCGCCATCTTTTGCGGTGCCCCGGTGCGGATGTATACCGCCGC
AACCACGCCGGCCACCGGGCGGCTGCACGGACACACTGTGGTGTCGCTGCCGGGGGCGGACGGGCGGGTGGACCTTGCCG
CCCTGCTGGCCGATCTTGGCCGGCTGGGTGTCAACGACGTCTGGTGCGAAGCCGGCATGGGGCTGGCCGGTGCCTTGCTG
CACGCCGGGCTGGTGGACGAGCTGGTGTGCTACATGGCGCCGGTGGTGCTGGGGCATTCCGCCCGCGGCATGTTCGACCT
GCCGCCGCTGGCTGCGCTGGCCGACAAGTCCTGCTGGCGCTGGCACGATGTCCGTTCAGTCGGCAACGACCTGCGTCTGA
CCCTGCGGCCGGGCAGCCAGGCTGGAGATTGA

Protein sequence : 
MFSADDHRYMARALQLARLGMTSTAPNPRVGCVVVSDGQVAGEGWHVRAGTPHAERHALAMAGERARGATAYVTLEPCSH
FGRTPPCADALLQAGVGRVVAAMVDPNPLVAGQGMTRLAAAGIECASGLLEAEACELNRGFVSRMTRGRPWLTVKLGISL
DGKTALADGQSQWITGAQARADVMRQRACHDVILTGSGTVRADNPQLTVRNLVPDVLPPALQDTPAGRLQAAAPVRQPLR
VIVDGAGTLDPDAAIFCGAPVRMYTAATTPATGRLHGHTVVSLPGADGRVDLAALLADLGRLGVNDVWCEAGMGLAGALL
HAGLVDELVCYMAPVVLGHSARGMFDLPPLAALADKSCWRWHDVRSVGNDLRLTLRPGSQAGD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-47 44
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-47 44