Gene Information

Name : LHK_00646 (LHK_00646)
Accession : YP_002794648.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG2056
EC number : -
Position : 612397 - 613707 bp
Length : 1311 bp
Strand : -
Note : -

DNA sequence :
ATGAACGCTGTTTTACTGGCTGTCGTTCTCATGCTCGGGCTCTCGCTGGCCCGGGTGAACGTGGTGATATCCCTGATCGT
GGCGAGCGTGGCTGGCGGGCTGGCCGGCGGACTCGACATGGCCGCCACCCTGAAGGCCTTCAATGCCGGCATTGGCGGCG
GGGCTGGCGTGGCCTTGTCATACGCCCTGCTCGGTGCCTTCGCACTGGCACTGGCGCAGTCGGGCCTGCCGCATGCGCTG
GCTGACAGGCTGCTGGCGATGGTGCAACGCGGACAAGGCACGCTGCTCAAGTGGGCCGTGCTCGGCGCCCTGGTCCTGAT
GGCCATATCGTCGCAAAACATCCTGCCCATCCACATCGCCTTCATTCCCCTGGTTGTACCGCCCCTGCTGTTCGTGCTGG
CCAAATTGCGGCTGGACCGCCGGGCAGTGGCCTGCGTGCTGACCTTCGGCCTGATTACGCCGTACATGACTATGCCAATC
GGATTCGGTGAAATCTATCTGAATCAAATCCTGATGAGCAATGTCGCCAAGGCCGGACTGGACACCTCCGGCATCCATGC
CAGCCACGCCATGCTGATTCCGGCCCTGGGCATGATTGCCGGCCTGCTGATCGCGCTGTTTGTCAGCTACCGCAAGCCGC
GCGATTACGACCTTGCACAGATCAGCGACGTCGAGCGTGAATCCGTGGCGTATTCGTCACGTTCCATCTGGGTATCGGTC
ATTGCCGTGGCCATTGCCTTCGCCGTGCAGCTGTCGGTTGATTCGATGCTGATCGGCGCACTGGCCGGCTTTCTGGTATT
CGTGCTGGGCGGCGTGGTCAAATGGCGCGAAGCCGACAGCATCTTCAGCGACGGCATGAAAATGATGGCCACCATCGGAC
TGGTGATGATCGCCGCTGCCGGTTTTGCCGAAGTACTGAAGGCCACCGGCGAAATCGGTGCACTGGTGCAGGCCTCTGCC
GACGCCATCGGCCACAGCAAGCCCCTGGCAGCACTGCTGATGCTGCTGGTCGGCCTGCTGGTCACCATGGGCATCGGCTC
GTCGTTTTCGACCATCCCGATCCTCGCCGCCATCTACGTGCCGCTGGCCATCGAAATGGGCTTTGGGCCGCTGGCCATCG
TCAGCCTCGTCGGCACGGCCGGCGCCCTGGGTGATGCCGGCAGCCCGGCGTCGGATTCCACCCTCGGCCCGACCGCCGGT
CTGAACGTGGACGGCCAGCACAACCACATCTGGGACACCGTGGTGCCGACCTTCCTGCACTACAACCTGCCGCTGCTGGT
GGCCGGCTGGATCGCCGCCATGGTGCTGTAA

Protein sequence :
MNAVLLAVVLMLGLSLARVNVVISLIVASVAGGLAGGLDMAATLKAFNAGIGGGAGVALSYALLGAFALALAQSGLPHAL
ADRLLAMVQRGQGTLLKWAVLGALVLMAISSQNILPIHIAFIPLVVPPLLFVLAKLRLDRRAVACVLTFGLITPYMTMPI
GFGEIYLNQILMSNVAKAGLDTSGIHASHAMLIPALGMIAGLLIALFVSYRKPRDYDLAQISDVERESVAYSSRSIWVSV
IAVAIAFAVQLSVDSMLIGALAGFLVFVLGGVVKWREADSIFSDGMKMMATIGLVMIAAAGFAEVLKATGEIGALVQASA
DAIGHSKPLAALLMLLVGLLVTMGIGSSFSTIPILAAIYVPLAIEMGFGPLAIVSLVGTAGALGDAGSPASDSTLGPTAG
LNVDGQHNHIWDTVVPTFLHYNLPLLVAGWIAAMVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1474 YP_005683838.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-66 56
CpI19_1481 YP_005685924.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-66 56
Cp1002_1472 YP_005681739.1 Na+/H+ antiporter NhaC Not tested PiCp 5 Protein 2e-66 56
cpfrc_01481 YP_003783881.1 hypothetical protein Not tested PiCp 5 Protein 2e-66 56