Gene Information

Name : LHK_00450 (LHK_00450)
Accession : YP_002794454.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Resistance
Product : Transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 420702 - 421151 bp
Length : 450 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATCGGCGAACTGGCGCAGGCGGCACAATGCACGCCGGAAACCGTGCGCTACTACGAAAAGGCCGGACTGCTGCC
GCCACCGTCACGCAGCGACGGCAATTACCGGGTCTACGGCCCGGCGCACCTGGAACGGCTGGTGTTCGTGCGCCACTGCC
GGGCGCTGGACATGACCCACGAGGAGATCCGCGAACTGCTGGAGCTGCGCGACGTGCCCGATGCCGACTGCGCGCAGGTC
AACGTGCTGCTGGACGCTCATATCGAGCATGTCGAGCGGCGCATCCGTGACCTGAACACGTTGCGCGAGCAACTGGCCAG
CCTGCGCCACCAGTGCCAGATCGCCAGTGCCACCCGCGACTGCGGCATCCTGCAGGCGCTGGCGCACGAGCCGCTGCCCG
AGCCGCGTCCCGCGGCCTGCGACGGCCACGGGCTGGGCGTGCACGACTGA

Protein sequence : 
MKIGELAQAAQCTPETVRYYEKAGLLPPPSRSDGNYRVYGPAHLERLVFVRHCRALDMTHEEIRELLELRDVPDADCAQV
NVLLDAHIEHVERRIRDLNTLREQLASLRHQCQIASATRDCGILQALAHEPLPEPRPAACDGHGLGVHD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-35 52
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 4e-30 44
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-30 44
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 8e-31 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 5e-30 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 3e-30 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 3e-30 44
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 8e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LHK_00450 YP_002794454.1 Transcriptional regulator BAC0301 Protein 1e-34 60
LHK_00450 YP_002794454.1 Transcriptional regulator BAC0058 Protein 4e-37 60