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Name : clpB (LHK_00433) Accession : YP_002794437.1 Strain : Laribacter hongkongensis HLHK9 Genome accession: NC_012559 Putative virulence/resistance : Virulence Product : ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.92 Position : 400857 - 403430 bp Length : 2574 bp Strand : - Note : Chaperone protein clpB DNA sequence : ATGCGGATTGACAAACTCACCACCAAATTCCAGCAAGCCCTGAGCGACGCCCAGAGCCTTGCCCTGGCCGAAGACAACCC GACCATCGAGCCCGTGCATCTTCTGGCGGCCATGCTTGACGATAATGACTCGGGCATCGGAGCACTGCTGGCTCGCGCCG GTGTCAACGTCGGCGGTCTGAAGACCGCACTGAAAGACACCATGCGCCGCCTGCCCAAGGTCAGCGGCACCGGCGGCGAA GTCACCGTCGGCCGTGATCTGGGCAATCTGCTCAACCTCACCGACAAGGCCGCCATGCAGCGCGGCGACCAGTTCATCGC CAGCGAACTCTTCCTGCTCGCCGTCTGCGACGACAAGGGCCAGACCGGCCAGCTGCTCAAGCAGTATGGCGGCCAGAAAG CAGCCATCACTGCCGCGATCGATGCCGTGCGCGGCGGCGAAACTGTCAACAGCGCCGACGCCGAAGGCAAGCGCGAAGCC CTGTCCAAATACACGCTGGACCTCACCGAGCGTGCCCGCGAAGGCAAGCTCGACCCGGTCATCGGCCGCGACGACGAAAT CCGCCGCGCCATCCAGGTGCTGCAACGCCGCACCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGCGTGGGCAAGACCG CCATCGTCGAAGGGCTGGCGCAGCGCATCGTCAACGGCGAGGTGCCGGAATCACTGAAGAACAAGCGCCTCCTGGTGCTG GATCTGGCCGCGCTGCTGGCCGGCGCCAAGTTCCGTGGCGAATTCGAAGAGCGCCTGAAGAGCGTGCTGGACGAACTGTC GAAGGACGAAGGCCAGACGCTGATCTTCATCGATGAAATCCACACCCTCGTCGGTGCCGGCAAGGCCGAAGGCGCCATGG ACGCCGGCAACATGCTCAAGCCCGCGCTGGCACGCGGCGAGCTGCACTGTATCGGCGCCACCACGCTCGACGAATACCGC AAGTACATCGAGAAGGATGCCGCGCTGGAGCGCCGCTTCCAGAAAGTCATGGTGAACGAGCCCTCGGTCGAGGACACCAT CGCCATCCTGCGCGGCCTGCAGGAAAAATACGAAATCCACCATGGCGTCGACATCACCGACCCGGCCATCGTGGCCGCTG CCGAGCTGTCGCACCGCTACATTACCGACCGCTTCCTGCCGGACAAGGCCATCGACCTGATCGACGAAGCCGCCAGCCGC ATCAAGATGGAAATCGACTCCAAGCCGGAATCGATGGACAAGCTCGACCGCCGCATCATCCAGCTCAAGATCGAGCGCGA GGCGGTCAAGAAGGAAACCGACGAAGCCTCGCAAAAGCGCCTCGCGCTGATCGAGGAGGAAATCGGCAAGCTCTCGAAGG AATACGCCGATCTGGACGAAATCTGGAAGGCGGAAAAGGCGCAGGTGGTCGGCAGCCAGTCGATCAAGGACGAACTCGAC AAGGTGCGCAGCCAGATCGAGGACGCCAAGCGCCGTGGTGACTTCGGCAAGGCCAGCGAATTGCAGTACGGCAAGCTGCC GGAACTCGAATCGCGCCTGAAGGCCGCCGAGGCCGGCGAAGGCAGCAAGGGCCAGAACCGCCTGCTGCGAACCGAAGTCG GCGCCGAGGAAATCGCCGAAGTGGTCAGCCGCGCCACCGGCATTCCGGTCAGCAAGATGCTGGAAGGCGAGCGCGAAAAA CTCCTGCACATGGAAGACGTGCTGCACCAGCGCGTGGTCGGGCAGGACGAAGCGGTGCGCGTGGTGGCCGACGCCATCCG CCGCAGCCGCTCCGGGCTGGCTGACCCCAACAAGCCGTATGGTTCCTTCCTGTTCCTCGGCCCGACCGGGGTGGGCAAGA CCGAGCTGTGCAAGACACTGGCCGGATTCATGTTCGACAGCGAGGATCATCTCATCCGCATCGACATGTCGGAATACATG GAGAAGCATTCGGTGGCCCGCCTGATCGGCGCGCCGCCGGGGTACGTCGGCTACGAGGAAGGCGGCTACCTGACCGAACA GGTGCGCCGCAAGCCCTACAGCGTCATCCTGCTCGACGAAGTGGAAAAGGCGCATCCGGACGTGTTCAACGTGCTGCTGC AAGTGCTCGACGACGGCCGCCTGACTGACGGACAAGGTCGCACGGTAGACTTCAAGAACACCGTGGTGGTGATGACCTCG AACGTCGGCAGCCAGCAGATCCAGAGCATGGCCGGGGATCATTACGACCTGATCAAGCTGGCGGTGATGAACGAGGTGAA GGGCTATTTCCGCCCGGAATTCATCAACCGCATCGACGAAGTGGTGGTGTTCCACGGACTGGACCAGGCCAACATCCGCG CCATTGCCCGCATCCAGCTCAAGCGGCTGGAAGCCCGTCTGGACAAGCTGGAACTGTCGCTGCAAGTGACCGACGACGCG CTCGACAAGCTGGCCGAAGCCGGCTTCGATCCGGTATACGGTGCCCGGCCGCTGAAGCGGGCGATCCAGAACGAGATCGA AAACCCGCTGGCCCGCGCCATCCTCGCCGGCAAATACCCACCAAAATCCGCCATCGTGGTGGACGTCAAGGACGGCGACA TCGTCTTTGCCTGA Protein sequence : MRIDKLTTKFQQALSDAQSLALAEDNPTIEPVHLLAAMLDDNDSGIGALLARAGVNVGGLKTALKDTMRRLPKVSGTGGE VTVGRDLGNLLNLTDKAAMQRGDQFIASELFLLAVCDDKGQTGQLLKQYGGQKAAITAAIDAVRGGETVNSADAEGKREA LSKYTLDLTERAREGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRLLVL DLAALLAGAKFRGEFEERLKSVLDELSKDEGQTLIFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYR KYIEKDAALERRFQKVMVNEPSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASR IKMEIDSKPESMDKLDRRIIQLKIEREAVKKETDEASQKRLALIEEEIGKLSKEYADLDEIWKAEKAQVVGSQSIKDELD KVRSQIEDAKRRGDFGKASELQYGKLPELESRLKAAEAGEGSKGQNRLLRTEVGAEEIAEVVSRATGIPVSKMLEGEREK LLHMEDVLHQRVVGQDEAVRVVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKTLAGFMFDSEDHLIRIDMSEYM EKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVVVMTS NVGSQQIQSMAGDHYDLIKLAVMNEVKGYFRPEFINRIDEVVVFHGLDQANIRAIARIQLKRLEARLDKLELSLQVTDDA LDKLAEAGFDPVYGARPLKRAIQNEIENPLARAILAGKYPPKSAIVVDVKDGDIVFA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 9e-102 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_002794437.1 | ClpB | VFG0079 | Protein | 1e-136 | 44 |
