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Name : mutS (LHK_00373) Accession : YP_002794377.1 Strain : Laribacter hongkongensis HLHK9 Genome accession: NC_012559 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 353313 - 355868 bp Length : 2556 bp Strand : - Note : DNA mismatch repair protein mutS; This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGAGTGCAAAAAATGACCAGCACACCCCAATGATGCAACAGTATCTGGCCCTGAAAGCCGACCACCCGGATACGCTGCT GTTTTACCGCATGGGTGACTTCTACGAGATGTTCTACGGCGATGCCGAAAAGGCCGCCCGCCTGCTGGACATCACGCTGA CGGCCCGTGGCCAGTCGGCCGGCCAGCCCATTCCCATGGCCGGCGTGCCGTTCCATGCCGTCGAGCAGTATCTGGCCCGG CTGGTGAAACTGGGCGAATCCGTCGCCATCTGCGAGCAGATCGGTGATCCGGCCACCAGCAAGGGGCCGGTCGAGCGGCG GGTGGTGCGGGTGGTGACACCGGGCACGCTGACCGATGCTGCCCTGCTCGACGACAAGCAGGAAAACCGGCTGGTGGCGC TGGCATTCCACAAGGGCCGGCTGGGCCTGGCCAGCCTGTCGCTCGCCAGCGGTGATTTCCGCGTACTGGAAACCGAGGCC GAGCGGCTGGGCACCGAGCTGGAGCGCCTGAAACCGGCCGAACTCCTGGTTGCCGACGACGGCTTTGCGCCGCGGCAGCT CCAGCAGACCGGCGTACCGGTGCGCCGGCTGCCACCGTGGCACTTTGACGTCACCAGCGCCCGCGAACGGCTGGCCCGCC ACTTCGGTGTGCAGGACCTGGCCGGCTTTGGTGCTGCTGACCTGAGCGTGGCCACCGGTGCTGCCGGTGCCCTGCTGGAA TACGCCCGCAGCACCCAGTCGGGCGAACTGGCGCACGTTGTCGGCCTGAGTGTCGAAGAAGCCAGCCAGTACCTCGACCT TGATGCCACCACGCGCCGCAACCTGGAACTGACCGAAACCATCCGCGGCGAAGCGGCGCCTACCCTGCTCTCGCTGCTGG ACCGCTGCGTCACCAGCATGGGCAGCCGGCTCTTGCGCGAATGGCTGCATCACCCGCTGCGTGACACCGCCGCCGTGCGG GCCCGGCAAGAGGCCATTGCCACCTTGCAGGTCTGCCACGCAGACATTCATCTGGCGCTGGACCCGGTGGCCGACGTGGA GCGGATTACGTCGCGTGTGGCACTGCGCAGCGCCCGTCCGCGTGACCTGGCAGCCCTGCGGGCCAGCCTTGCCCAGCTGC CGCAGGTCAAGGCCGTGCTGGCGGGCCTTGGCAATCCGCTGCTGGCCACGCTGGATGCTGCCCTGCCGCAAGACAGTCCG CTGGCAGCACTGTTGCAACAGGCCATTGCGGCGGAGCCGGCCGCCATGGTGCGGGACGGTGGAGTGTTTGCCGCCGGCTA CCACGCCGAACTGGACGAGCTGCGCGCCATCCAGACCGATTGCAGTGTCTTTCTGGCCGATCTGGAAGCACGCGAGCGTG AACGTACCGGCATCAGCACCCTCAAGGTCGAATACAACAAGGTGCACGGTTTTTACATCGAGGTCGGCCGGGTCCACAGC GAGAAGGTTCCGGACGATTATCGCCGCCGGCAGACGCTCAAGAATGCCGAGCGCTACATCACGCCGGAACTCAAGACTTT TGAAGACAAGGCACTGTCGGCCCGCGAACGGGCACTGGCGCTGGAAAAGGCCTTGTGGGAAACGCTGCTCGATACGCTGG CACCGCACGTTCCGGCGCTGCAAAAACTGGCCCGGGCACTGGCCAGCCTGGATGTTCTGGCGACGCTGGCCGAACGCGCC GCGACCCTGGATTTTGTCTGCCCGGTCCTGACGCGCAGTGCCGAAATCCGCATCCAGTCCGGCCGCCATCCGGTGGTCGA GGCGCAGGTCGAGCGTTTTGTCGCCAACGACACCCAGCTGGCACCGGACCGCAAGCTGCTGCTGGTGACCGGCCCCAACA TGGGCGGCAAATCCACTTACATGCGCCAGGTGGCCCAGATTGTCCTGCTGGCCTACATCGGCAGTTTCGTCCCGGCCAGC CAGGCACAGATCGGCCGGGTGGAACGCATCTTTACCCGGATCGGCGCATCGGACGATCTGGCCGGCGGACGGTCGACTTT CATGGTTGAAATGACCGAAACTGCCAACATTTTGCACAACAGCAACGAGTGGAGTCTGGTGCTGATGGATGAAGTGGGCC GGGGGACCAGTACGTTTGACGGTCTGGCACTGGCCTGGGCGATTGCCCGTCGCCTGATTGAAAAGAACCGGGCCTATACT CTGTTTGCCACGCACTATTTCGAACTGACCCGGCTGGCGGCCGATTATCCGATGGTGGCCAACGTGCATCTGTCAGCGGT GGAGCACAAGGACCGCATCGTCTTCCTGCATCATGTCGATGACGGCCCGGCGAGCCAGAGCTACGGTTTGCAGGTGGCTG CACTGGCAGGCGTGCCGGCACCGGTCATCCGCGACGCCCGGCGCAAGCTGGCCGAACTGGAGACCCAGGCGGCGACAGGT CAGGGACCAGACCTCTTCATGATGCCGGCGGAACCGGTACCAAACGTCGCATCCACCCCACACCCGCTGGTCGAGGCATT TGCCGAACTCGACCCGGAAATGCTCAGTCCGCGCGAGGCTCTTGACTGGCTGTTCCGCATGAAAAAGCATTTTTGA Protein sequence : MSAKNDQHTPMMQQYLALKADHPDTLLFYRMGDFYEMFYGDAEKAARLLDITLTARGQSAGQPIPMAGVPFHAVEQYLAR LVKLGESVAICEQIGDPATSKGPVERRVVRVVTPGTLTDAALLDDKQENRLVALAFHKGRLGLASLSLASGDFRVLETEA ERLGTELERLKPAELLVADDGFAPRQLQQTGVPVRRLPPWHFDVTSARERLARHFGVQDLAGFGAADLSVATGAAGALLE YARSTQSGELAHVVGLSVEEASQYLDLDATTRRNLELTETIRGEAAPTLLSLLDRCVTSMGSRLLREWLHHPLRDTAAVR ARQEAIATLQVCHADIHLALDPVADVERITSRVALRSARPRDLAALRASLAQLPQVKAVLAGLGNPLLATLDAALPQDSP LAALLQQAIAAEPAAMVRDGGVFAAGYHAELDELRAIQTDCSVFLADLEARERERTGISTLKVEYNKVHGFYIEVGRVHS EKVPDDYRRRQTLKNAERYITPELKTFEDKALSARERALALEKALWETLLDTLAPHVPALQKLARALASLDVLATLAERA ATLDFVCPVLTRSAEIRIQSGRHPVVEAQVERFVANDTQLAPDRKLLLVTGPNMGGKSTYMRQVAQIVLLAYIGSFVPAS QAQIGRVERIFTRIGASDDLAGGRSTFMVEMTETANILHNSNEWSLVLMDEVGRGTSTFDGLALAWAIARRLIEKNRAYT LFATHYFELTRLAADYPMVANVHLSAVEHKDRIVFLHHVDDGPASQSYGLQVAALAGVPAPVIRDARRKLAELETQAATG QGPDLFMMPAEPVPNVASTPHPLVEAFAELDPEMLSPREALDWLFRMKKHF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_002794377.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 55 |
