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Name : gabD (LHK_02822) Accession : YP_002796811.1 Strain : Laribacter hongkongensis HLHK9 Genome accession: NC_012559 Putative virulence/resistance : Unknown Product : GabD Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2721302 - 2722762 bp Length : 1461 bp Strand : - Note : Succinate-semialdehyde dehydrogenase [NAD(P)] DNA sequence : ATGCTGAAACTCAATGATCCCGGCCTGCTGGCCGACCGCTGCCTGATCGGTGGCGAGTGGTGCGCGGCAGACGACGGTGC CACGCTGGCCGTTACCAATCCGGCTACCGGCGCCGTGCTGGCGCGGGTGCCGAAAATGGGCCGTGCCGAAACCCGCCGCA CCCTCGAAGCCGCCGAGGCGGCCTGGCCGGCCTGGCGCCGCCGGACCGCCAAGGAGCGGGCCGTCATCCTGCGCCGCTGG TTTGACCTGGTGACGGCGCATGCCGACGATCTGGCTGTCATCCTGACCGCCGAACAGGGCAAGCCGCTGGCCGAAGCCAA AGGCGAAATCCTCTATGGCGCCAGTTATCTCGAGTGGTTTGCCGAAGAGGCCAAGCGTATCTACGGCGACACCATTCCTG CACCCGGAGCCGACCGGCGCATTGTCGTGACCAAGGAGCCGATCGGCGTCTGTGCGGCCGTCACGCCGTGGAATTTTCCC AACGCCATGATCACCCGCAAGGTCGGCCCGGCCCTGGCGGCCGGCTGCCCGATCGTGCTCAAGCCTGCCAGCCAGACGCC GCTGTCGGCACTGGCGCTGGCGGTGCTGGCCGAACGCGCCGGGGTGCCGGCCGGAGTGTTCAGCGTCATCACCGGCGCGG CCGGTGAAATCGGTGCCGAGCTGACCGGCAGCGCCATCGTGCGCAAGTTCAGCTTTACCGGTTCGACCGAAGTCGGCCGT CAGCTGATCGCCCAGTGCGCCGGCACGGTCAAGAAGGTCTCGATGGAGCTGGGCGGCAACGCGCCCTTCATCGTGTTTGA CGATGCCGACCTGGATGCCGCGGTCGAAGGGGCGCTGGCCAGCAAGTACCGCAACGCCGGCCAGACCTGCGTGTGCGCCA ACCGGCTGTACGTGCAGGCGGGAGTCTACGAGGCATTCGCCGCCAAACTGGCCGCTGCCGTGGCCGGCCTCAAGGTCGGT GACGGTTTCGACGCCGGCGTGACGCAGGGGCCGCTGATCGACGAGGCTGCCGTACGCAAGGTGGAAGAGCATGTGGCCGA TGCGCTGGCGCACGGCGCGCGGTTGCTGGCCGGTGGCCGGCGGCATGCGCTGGGCGGCACCTTTTTCGAGCCGACGGTGC TGACCGGGGTCACGCAGTCGATGCGGGTGGCGCGCGAGGAAACCTTCGGGCCGCTGGCGCCGCTGTTCCGCTTTGAAACC GAAGCCGAAGTGATCGCCATGGCCAATGCCACCGAATTCGGGCTGGCCAGCTACTTTTACAGCCGTGACATCGGCCGCAT CTGGCGCGTGGCCGAGGGGCTGGAGTACGGCATGGTGGCAGTCAACAGCGGCCTGCTGTCCAACGAAATGGCACCGTTTG GCGGCGTGAAGCAGTCCGGCCTCGGGCGCGAAGGCTCCCGCTACGGCATCGAGGACTATCTGGAAATCAAGTACCTGTTG CTGGGCGGACTGGCTGGCTGA Protein sequence : MLKLNDPGLLADRCLIGGEWCAADDGATLAVTNPATGAVLARVPKMGRAETRRTLEAAEAAWPAWRRRTAKERAVILRRW FDLVTAHADDLAVILTAEQGKPLAEAKGEILYGASYLEWFAEEAKRIYGDTIPAPGADRRIVVTKEPIGVCAAVTPWNFP NAMITRKVGPALAAGCPIVLKPASQTPLSALALAVLAERAGVPAGVFSVITGAAGEIGAELTGSAIVRKFSFTGSTEVGR QLIAQCAGTVKKVSMELGGNAPFIVFDDADLDAAVEGALASKYRNAGQTCVCANRLYVQAGVYEAFAAKLAAAVAGLKVG DGFDAGVTQGPLIDEAAVRKVEEHVADALAHGARLLAGGRRHALGGTFFEPTVLTGVTQSMRVAREETFGPLAPLFRFET EAEVIAMANATEFGLASYFYSRDIGRIWRVAEGLEYGMVAVNSGLLSNEMAPFGGVKQSGLGREGSRYGIEDYLEIKYLL LGGLAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-132 | 67 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-76 | 42 |
