Gene Information

Name : LHK_02806 (LHK_02806)
Accession : YP_002796795.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 2699935 - 2701227 bp
Length : 1293 bp
Strand : -
Note : -

DNA sequence :
TTGGGATCTGACGTAAAGATTGCGATCATTGGCTTAGGGTATGTCGGGCTTCCACTGGCCGTTGAGTTTGGCAAGTCCCG
CTCAGTTGTTGGTTTCGATATTAATGAAGCTCGAATTGCCGAGCTGCGCACAGGGAAAGATAGCACGCTCGAAGTAACCC
CGGACGATCTGAGCGCTGCCCGAAAACTCCAATACAGCAGTGAAAGGAGTAAGCTAGAAGAGTGCGGAATTTTTATTGTT
ACCGTGCCCACACCGATCGATAAAGCTAATCGCCCTGACCTGACGCCTCTGATAAAAGCCAGTGAAACGGTTGGCAGGGT
GATGAAATCTGGCGCGATTGTGATTTACGAGTCAACGGTTTATCCGGGTTGTACTGAAGAAGTCTGTGTGCCGATCTTGG
AAAAGTATTCGGGGCTTAAGTTCAATAAAGACTTCTTCTGTGGCTACAGCCCAGAGCGGATCAATCCTGGTGACAAGATC
AACACCCTTACCAAGATAAAGAAGATCACCAGCGGCTCAACGCCCGAAATTGCAAAAGTGGTAGATCAACTTTACGGCAG
TATTATTTCTGCAGGTACTTTTCCCGCAACCTGTATTAAAGTTGCTGAAGCAGCCAAGGTCATCGAAAACACACAACGTG
ACCTTAATATCGCCTTGGTGAACGAGCTTTCCGTAATTTTTGACCGATTGGGTATCGACACTATTGAGGTGCTTAATGCT
GCCGGCAGTAAATGGAACTTCCTTCCTTTTCGCCCCGGCATGGTCGGTGGTCATTGCATCGGAGTCGACCCCTATTACCT
GACCCACAAAGCCGAAGAAGTCGGCTATCACCCGCAAGTCATCTTGGCTGGGCGTCGCATTAACGACAATATGGCACGAT
ATGCGGCTCGCAATGTTATTCGCCTGATGCTAAAAAACGGTATTGACGTAGCGCGCAGTACAGTAGGAGTTCAGGGTATC
ACCTTCAAGGAAAATTGCCCAGACATCCGCAACAGCAAAGTTGCTGATCTTGTCAGGGAGCTCGAACACTGGGGGGCTAA
GGTGGTGGTTGCTGACCCTTGGGCTAATTCTGATGAGGTTTTTTACGAGTACGGTATCCGTCTGGGAACTATCAATCAAG
AGAATCCCGTTGATGCCTTGATCGTCGCGGTCGGTCATAACGAGTTTCGATGTGAGACTCCAGTTGACCTGCGTGCTTTC
TGCCGAGGTGATAAACCGGTGCTGGGAGATCTAAAAGCTTTATTTGATCGTCATGCGGCATCTGATGCCGGCTTTACCGT
GTTTCGTCTTTAA

Protein sequence :
MGSDVKIAIIGLGYVGLPLAVEFGKSRSVVGFDINEARIAELRTGKDSTLEVTPDDLSAARKLQYSSERSKLEECGIFIV
TVPTPIDKANRPDLTPLIKASETVGRVMKSGAIVIYESTVYPGCTEEVCVPILEKYSGLKFNKDFFCGYSPERINPGDKI
NTLTKIKKITSGSTPEIAKVVDQLYGSIISAGTFPATCIKVAEAAKVIENTQRDLNIALVNELSVIFDRLGIDTIEVLNA
AGSKWNFLPFRPGMVGGHCIGVDPYYLTHKAEEVGYHPQVILAGRRINDNMARYAARNVIRLMLKNGIDVARSTVGVQGI
TFKENCPDIRNSKVADLVRELEHWGAKVVVADPWANSDEVFYEYGIRLGTINQENPVDALIVAVGHNEFRCETPVDLRAF
CRGDKPVLGDLKALFDRHAASDAGFTVFRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-118 64
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-118 64
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 7e-106 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LHK_02806 YP_002796795.1 UDP-N-acetyl-D-mannosaminuronate dehydrogenase VFG0431 Protein 2e-118 64