Gene Information

Name : otcC-2 (LHK_02733)
Accession : YP_002796723.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : OtcC
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 2604161 - 2605168 bp
Length : 1008 bp
Strand : -
Note : Ornithine carbamoyltransferase, catabolic

DNA sequence :
ATGGCCTTCAATCTGAAGAATCGCAGCTACCTCAAGCTCCTCGACTTCACCCCGCGTGAAATCCGTTACCTGCTGGACCT
GTCGCGCGACCTGAAGCGCGCCAAGTACGCTGGCAACGAAGAGCAGCGTCTGGTTGGCAAGAACATTGCTCTGATTTTCG
AAAAGACCTCGACCCGTACCCGTTGCGCGTTCGAAGTGGCTGCCTATGACCAGGGCGCACACGTGACCTATCTCGGCCCG
TCCGGCTCGCAGATCGGCCACAAAGAATCCATGAAAGATACCGCCCGCGTTCTGGGCCGCATGTACGACGCCATCGAATA
CCGTGGCTTCGCACAGGACGTGGTTGAAGAACTGGCTGCCTACGCTGGCGTGCCGGTCTACAACGGCCTGACCGACGAAT
GGCACCCGACCCAGATGCTGGCCGACGTGCTGACCATGATCGAAAACAGCGACAAGCCGCTGAGCCAGATCGCCTACGCC
TACGTTGGTGACGCCCGCTTCAACATGGCCCGCTCGCTGATGGTTGTCGGCTGCAAGCTGGGCATGGACGTCCGCATCGG
TGCTCCGAAGCAACTGTGGCCGGAAGAAGCCCTGATCGCCGAGTGCAAGAAGATTGCCGCCGAAACCGGCGCCCGCCTGA
CCCTGACCGAAGATCCGGCTGCTGCCGTGAACGGCGTTGACTTCATCCACACCGACGTCTGGGTGTCGATGGGCGAGCCG
AAGGAAGTCTGGGACGAGCGTATTGCTCTGCTGAGCAAGTTCCAGGTCAACAAGGAACTGATGGCTGCTGCCAAGAACCC
GGCCGTGAAGTTCATGCACTGCCTGCCGGCCTTCCACAACAGCGAAACCACCGTGGGCAAGGATATCGCCAAGCAGTATC
CGCAGTTCGCCAACGGCATCGAAGTGACCGAAGACGTGTTCGAAACCACCGCCAACGTGGCCTTCGAACAGGCTGAAAAC
CGCATGCACACCATCAAGGCCATCATGGTCGCTACTCTGGGCGCCTGA

Protein sequence :
MAFNLKNRSYLKLLDFTPREIRYLLDLSRDLKRAKYAGNEEQRLVGKNIALIFEKTSTRTRCAFEVAAYDQGAHVTYLGP
SGSQIGHKESMKDTARVLGRMYDAIEYRGFAQDVVEELAAYAGVPVYNGLTDEWHPTQMLADVLTMIENSDKPLSQIAYA
YVGDARFNMARSLMVVGCKLGMDVRIGAPKQLWPEEALIAECKKIAAETGARLTLTEDPAAAVNGVDFIHTDVWVSMGEP
KEVWDERIALLSKFQVNKELMAAAKNPAVKFMHCLPAFHNSETTVGKDIAKQYPQFANGIEVTEDVFETTANVAFEQAEN
RMHTIKAIMVATLGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 3e-96 60
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-94 60
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-94 60
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-94 60
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-94 60
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-94 60
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-94 60