|
Name : otcC-1 (LHK_02728) Accession : YP_002796718.1 Strain : Laribacter hongkongensis HLHK9 Genome accession: NC_012559 Putative virulence/resistance : Unknown Product : OtcC Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0078 EC number : 2.1.3.3 Position : 2597261 - 2598265 bp Length : 1005 bp Strand : - Note : Ornithine carbamoyltransferase, catabolic DNA sequence : ATGGCCTTTAATCTGAAAAGCCGTCATTTCCTCAAAGAACTCGATTTCACCCCGCGCGAAATCCATTATCTGCTGGACCT TGCCCGTGACCTCAAGCGCGCCAAATACACCGGCAACGAAGTGCCGCGCCTCAAGGGCAAGAACATCGCGCTGATTTTCG AAAAGACCTCGACCCGTACCCGCTGCTCGTTTGAAGTGGCTGCGCATGACCAGGGCGCCCACGTGACCTACATCGACCCG AGCAGCTCGCAGCTTGGTCACAAGGAAAGCATCGCCGACACCGCCCGCGTGCTGAGCCGTTTCTATGACGGCATCGAGTT CCGCGGCTTTGCCCAGGAAGATGTCGAAGAGCTGGCCCGCTATTCCAGCGTGCCGGTCTACAACGGCCTGACTGACGCCT GGCACCCGACACAGATGCTGTGCGACGTGCTGACCATGACCGAAAACAGCGACAAGCCGCTGACCGAAATCGCCTATGCC TATGTCGGCGATGCCCGCAACAACATGGGGCATTCACTGATGGTGATCGGCTGCCTGCTGGGCATGGACGTCCGTATCGG CGGGCCGAAAGACCTGTCGCCGGACCCCGCGCTGGTCAAGCAATGTCAGGAAATCTGCAAGTCCACCGGTGCCCGCCTGA CCGTGACCGATGACCCGCATGTGGCAGTCAAGGGCGTGGATTTCATCCATACCGACGTGTGGGTGTCGATGGGCGAGCCG ATCGAAAGCTGGGGCGAGCGCATCAAGCTGCTGACGCCGTTCCGGGTGGATTCGAAGCTGATGGCTGCCACCGGCAATCC CAAGGTTAAGTTCATGCACTGCCTGCCGGCTTTCCACAATGCGAAAACCAAGGTCGGCAAGCAGATCGCCGCCCAGTATC CGCAGTTTGCCGACGGCATCGAAGTGACCGACGAGGTGTTTGAAGGTCCGGCCTGCATTGCTTTCGAGCAGGCTGAAAAC CGCATGCACACCATCAAGGCCATCATGGTGGCCACGCTGGCCTGA Protein sequence : MAFNLKSRHFLKELDFTPREIHYLLDLARDLKRAKYTGNEVPRLKGKNIALIFEKTSTRTRCSFEVAAHDQGAHVTYIDP SSSQLGHKESIADTARVLSRFYDGIEFRGFAQEDVEELARYSSVPVYNGLTDAWHPTQMLCDVLTMTENSDKPLTEIAYA YVGDARNNMGHSLMVIGCLLGMDVRIGGPKDLSPDPALVKQCQEICKSTGARLTVTDDPHVAVKGVDFIHTDVWVSMGEP IESWGERIKLLTPFRVDSKLMAATGNPKVKFMHCLPAFHNAKTKVGKQIAAQYPQFADGIEVTDEVFEGPACIAFEQAEN RMHTIKAIMVATLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0103 | NP_763658.1 | ornithine carbamoyltransferase | Not tested | SCCpbp4 | Protein | 3e-92 | 57 |
| argF | NP_645867.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 1e-91 | 57 |
| arcB1 | YP_186044.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 1e-91 | 57 |
| argF | YP_493760.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 1e-91 | 57 |
| argF | NP_371693.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 7e-92 | 57 |
| argF | NP_374285.1 | ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 7e-92 | 57 |
| SAKOR_01090 | YP_008491278.1 | Ornithine carbamoyltransferase | Not tested | vSa¥ã | Protein | 9e-92 | 57 |
