Gene Information

Name : rnpH (LHK_02643)
Accession : YP_002796633.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : RnpH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 2515003 - 2515719 bp
Length : 717 bp
Strand : -
Note : Ribonuclease PH

DNA sequence :
ATGCGTCCTTCGCAACGTGCCGCCAGCGAGCTGCGGCCTGTCCGTTTCATCCGCCACTACACCCGCCATGCCGAAGGTTC
GGTGCTGGTCGAGTTTGGCGATACCAAAGTGATCTGCACGGCGACGGTGGAAGAGTCGGTGCCGGGCTTTCTGAAAGGCA
AGGGGCAGGGCTGGGTCACGGCGGAATACGGCATGCTGCCGCGCTCCACCCACAGCCGGATGCGGCGCGAGGCCGCCAGC
GGCAAACAGTCCGGCCGCACGCAGGAAATCCAGCGCCTGATCGGCCGCAGCCTGCGGGCCGTGGTGGACCTGCAAAAGCT
CGGAGAGCGGCAGATCGTCGTCGATTGTGACGTGATCCAGGCCGATGGCGGCACGCGCACAGCCAGCATTTCCGGTGCCT
GGGTGGCGCTGGCTGATGCCATTGACGGCCTGATGGCCAAGGGGCTGCTGACGGAGAATCCGTTGCGTGACCATGTGGCA
GCGGTGTCGGTCGGCATGGTCGACGGGCAGCCGGTGCTGGACCTCGATTACACCGAGGATTCGGGGTGCGATACCGACAT
GAACGTGGTGATGACCGGGCAGGGCGGGTTTGTCGAAATCCAGGGAACGGCCGAAGGTGTACCGTTTTCACGCGAGGACA
TGCAGGCACTGCTGGCGCTGGCGGACGAGGGTATCCGCGCGATTGTCGGCTTGCAGCAGGCGGCGCGCCAGTCCTGA

Protein sequence :
MRPSQRAASELRPVRFIRHYTRHAEGSVLVEFGDTKVICTATVEESVPGFLKGKGQGWVTAEYGMLPRSTHSRMRREAAS
GKQSGRTQEIQRLIGRSLRAVVDLQKLGERQIVVDCDVIQADGGTRTASISGAWVALADAIDGLMAKGLLTENPLRDHVA
AVSVGMVDGQPVLDLDYTEDSGCDTDMNVVMTGQGGFVEIQGTAEGVPFSREDMQALLALADEGIRAIVGLQQAARQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 6e-64 57