Gene Information

Name : LHK_02584 (LHK_02584)
Accession : YP_002796574.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2469230 - 2470258 bp
Length : 1029 bp
Strand : +
Note : Phage major capsid protein, P2 family similar to Xoo1607

DNA sequence :
ATGCGCAATGACACCCGCCTGCAGTACACCCAGTTTGTCACCCAACTGGCCCGACTCAACAGCGTCCCGTCCGCTGAAAA
ATCCTTCACCGTCGCCCCGAGCATCCAGCAGACGCTGGAGAGCCGCATCCAGCAGTCGAGCGAATTCCTGTCGCGCATCA
ACGTGATCGGTGTGCCCGAGATGGCCGGTGAAAAAATCGGCCTCGGCGTCACCGGCACCATCGCCGGCCGCACCCGAACC
GGGCCGGGCAAGCCGCGTGTGGCCCGGTCGGTGGCCGACCTCGATTCGCACAAGTACCAGTGCGCCAAGACCAACTTCGA
CACCGCCATCCCGTACCAGCAGCTCGACGTGTGGGCGAAGTTCCCGGACTTCCAGACCCGCCTGCGCGACGCCATCCTGA
AGCAGCAGGCGCTGGACCGCATCATGATCGGCTTCAACGGTACTTCGGTGGCCGAGGATACCGACCGGGACAGCAACCCG
CTGCTGCAGGACGTCAACAAGGGCTGGTTGCAGCAGTACCGTGAGCATGCACCGGAGCGGGTCATGTCCGAGGTGGCCGA
GAGTTCCGGCAAGGTGAAGATCGGGCCGGCCGTTACCGGGGCCGAAGGCTACAGGAACCTCGACGCACTGGTGTTCGATG
CGGTTGAAAACCTGATCGACGAGGCGTTTGCCGAACATCCGGACCTCGTGGTGATCGTCGGGCGCAGCCTGCTGGCCGAC
AAGTATTTCCCGATCATCAACAAGGACAACCCGCCGACCGAGCAGCTGGCGGCCGACATGGTGATCAGCCAGAAGCGCAT
CGGCAACCTGCCGGCGGTGCGGGCCCCGTTCATGAAGGCCGGCAGCATGCTGGTCACGCCGCTGTCGAACCTGTCGATCT
ACTGGCAGGAAGGCGGCCGCCGCCGGCATGTACGCGAGGAGCCGGACTACGACCGGATCGCCAACTACGAATCGAGCAAC
GACGCCTACGTGGTCGAGCGCTACGAGGCCGGTTGCCTGATCGAAAACATCGAACTGGTGCCGGCATGA

Protein sequence :
MRNDTRLQYTQFVTQLARLNSVPSAEKSFTVAPSIQQTLESRIQQSSEFLSRINVIGVPEMAGEKIGLGVTGTIAGRTRT
GPGKPRVARSVADLDSHKYQCAKTNFDTAIPYQQLDVWAKFPDFQTRLRDAILKQQALDRIMIGFNGTSVAEDTDRDSNP
LLQDVNKGWLQQYREHAPERVMSEVAESSGKVKIGPAVTGAEGYRNLDALVFDAVENLIDEAFAEHPDLVVIVGRSLLAD
KYFPIINKDNPPTEQLAADMVISQKRIGNLPAVRAPFMKAGSMLVTPLSNLSIYWQEGGRRRHVREEPDYDRIANYESSN
DAYVVERYEAGCLIENIELVPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13466.1 predicted major capsid protein Not tested PAGI-6 Protein 2e-97 59
STY4625 NP_458707.1 putative major capsid protein Not tested SPI-7 Protein 6e-87 53
t4319 NP_807914.1 major capsid protein Not tested SPI-7 Protein 6e-87 53