Gene Information

Name : LHK_02463 (LHK_02463)
Accession : YP_002796454.1
Strain : Laribacter hongkongensis HLHK9
Genome accession: NC_012559
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2350865 - 2351953 bp
Length : 1089 bp
Strand : +
Note : -

DNA sequence : 
ATGGGACTGGGTTCCTACCCGGCTACCAGCATCAAGCAGGCTGGCGAGTCAGGGGAGGCCGCCCGCTTGCTGGTGCTACA
GGGTGTTGACCCCATCGACCACAAGCGAGAGCAAGAGGCCGCGGCTAAAGCTGCGAGTGAGTGCCTGACGTTCGAGAACG
CCGCCATCCGTACCTACGAAACACTGTCGCCAGGATGGTCAAACAGGCATCACGGAGTGGACTGGATTAACTCGCTGCGC
CGCCATGTCTTTCCGAAGATCGGGGCCAGACCCGTGGCTGACCTGGTACGGGCTGACTTTGCTGATGTGCTGCAACCGAT
CTGGCTGGCGCTTCCGGATACCGCTGGCCGGGTGCGTCGGCGCATGCATACCGTCATGGAATGGTGTCTGGCCCGCGACC
TGATCGCGGCCAACCAATGCGATAGTGCCCTGAGCCGCCTGCTGCCCAAGCAACCGAGCAAGGCCGAGCGGGAAGAACAT
CACCCTGCCATGCCATGGCGCTTGCTCCCCGCCTTTGTGGCCGCTCACCTTGGCGATGGCAAACGATACAGCGTCATCCG
CCCCATGCTGGAATTTCTGATCCTCACTGCCGCCCGGTCTGGCGAGGTGCGCGGCATGACATGGGGCGAGGTCGATCTGA
AAGCCAACATCTGGACGATTCCCGGCGAGCGCATGAAAGCCGGTGTCACCCATCAGGTGCCGCTGTCTGATCGCGCCATA
ACCATCCTGCGCCAGCAACGCGAGCAGCACCCGTTGGCCTCCCTGGTATTCCCTGCGCCCCGTGGGGGCGTAGCATCGGA
CATGACGCTGACCAAGTACCTGCGTGACGTGGACGCCCCCAGCGATACCGAAGGTCGCCCGGCGACCGCACATGGATTCC
GCAGTACGTTCAAGGATTGGGCCATCGAACACGGCTATCCGGGCGAGCTATCCGAAAAGGCGCTGGCGCACACGATCAAA
AACAAGGTGGAAGCTGCCTACCATCGCTCCAGCCAACTGGAACAGCGCCGTGAGCTGATGCAGGCATGGTCCGAGTACGT
GGAAAGCGGACGGGCCGGTGGGATAACGAACATCCGACAGACAGCCTGA

Protein sequence : 
MGLGSYPATSIKQAGESGEAARLLVLQGVDPIDHKREQEAAAKAASECLTFENAAIRTYETLSPGWSNRHHGVDWINSLR
RHVFPKIGARPVADLVRADFADVLQPIWLALPDTAGRVRRRMHTVMEWCLARDLIAANQCDSALSRLLPKQPSKAEREEH
HPAMPWRLLPAFVAAHLGDGKRYSVIRPMLEFLILTAARSGEVRGMTWGEVDLKANIWTIPGERMKAGVTHQVPLSDRAI
TILRQQREQHPLASLVFPAPRGGVASDMTLTKYLRDVDAPSDTEGRPATAHGFRSTFKDWAIEHGYPGELSEKALAHTIK
NKVEAAYHRSSQLEQRRELMQAWSEYVESGRAGGITNIRQTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1120 NP_286655.1 P4 family integrase Not tested TAI Protein 1e-77 49
Z1559 NP_287063.1 P4 family integrase Not tested TAI Protein 1e-77 49
int AAL08426.1 integrase Not tested SRL Protein 2e-77 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LHK_02463 YP_002796454.1 Integrase VFG0672 Protein 1e-77 49